Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 13 studies | 35% ± 13% | |
astrocyte | 13 studies | 29% ± 15% | |
glutamatergic neuron | 9 studies | 43% ± 23% | |
interneuron | 6 studies | 40% ± 21% | |
retinal ganglion cell | 6 studies | 34% ± 14% | |
GABAergic neuron | 6 studies | 40% ± 20% | |
neuron | 5 studies | 27% ± 14% | |
granule cell | 4 studies | 29% ± 10% | |
fibroblast | 4 studies | 21% ± 4% | |
OFF-bipolar cell | 4 studies | 24% ± 5% | |
retinal cone cell | 4 studies | 22% ± 4% | |
retinal rod cell | 4 studies | 31% ± 8% | |
endothelial cell | 3 studies | 39% ± 17% | |
GABAergic interneuron | 3 studies | 21% ± 4% | |
progenitor cell | 3 studies | 33% ± 8% | |
ON-bipolar cell | 3 studies | 22% ± 4% | |
glycinergic amacrine cell | 3 studies | 31% ± 6% | |
rod bipolar cell | 3 studies | 24% ± 4% | |
ependymal cell | 3 studies | 41% ± 11% | |
ciliated cell | 3 studies | 16% ± 0% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9418.52 | 2642 / 2642 | 100% | 112.28 | 703 / 705 |
ovary | 99% | 2540.26 | 179 / 180 | 57% | 9.39 | 245 / 430 |
skin | 46% | 662.17 | 839 / 1809 | 81% | 72.42 | 383 / 472 |
kidney | 89% | 1294.16 | 79 / 89 | 35% | 5.06 | 317 / 901 |
thymus | 83% | 1146.78 | 543 / 653 | 39% | 4.59 | 238 / 605 |
uterus | 92% | 1529.82 | 156 / 170 | 18% | 2.82 | 81 / 459 |
breast | 88% | 1284.51 | 403 / 459 | 20% | 1.55 | 221 / 1118 |
adipose | 97% | 1763.42 | 1162 / 1204 | 0% | 0 | 0 / 0 |
heart | 84% | 1437.92 | 722 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 81% | 25.29 | 65 / 80 |
lung | 66% | 777.40 | 380 / 578 | 12% | 1.14 | 135 / 1155 |
esophagus | 52% | 758.04 | 758 / 1445 | 7% | 0.64 | 12 / 183 |
adrenal gland | 29% | 276.81 | 74 / 258 | 28% | 6.68 | 64 / 230 |
intestine | 47% | 630.72 | 458 / 966 | 5% | 0.83 | 25 / 527 |
prostate | 49% | 583.97 | 121 / 245 | 1% | 0.07 | 5 / 502 |
bladder | 38% | 535.86 | 8 / 21 | 8% | 0.79 | 38 / 504 |
spleen | 40% | 402.82 | 96 / 241 | 0% | 0 | 0 / 0 |
pancreas | 1% | 10.52 | 4 / 328 | 35% | 3.57 | 63 / 178 |
blood vessel | 35% | 439.01 | 465 / 1335 | 0% | 0 | 0 / 0 |
stomach | 27% | 320.35 | 97 / 359 | 5% | 0.92 | 15 / 286 |
lymph node | 0% | 0 | 0 / 0 | 7% | 1.42 | 2 / 29 |
liver | 0% | 0 | 0 / 226 | 6% | 0.95 | 26 / 406 |
muscle | 1% | 13.33 | 11 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032956 | Biological process | regulation of actin cytoskeleton organization |
GO_0030036 | Biological process | actin cytoskeleton organization |
GO_1904951 | Biological process | positive regulation of establishment of protein localization |
GO_0080135 | Biological process | regulation of cellular response to stress |
GO_0010812 | Biological process | negative regulation of cell-substrate adhesion |
GO_1904950 | Biological process | negative regulation of establishment of protein localization |
GO_0003093 | Biological process | regulation of glomerular filtration |
GO_0051497 | Biological process | negative regulation of stress fiber assembly |
GO_0048041 | Biological process | focal adhesion assembly |
GO_0015629 | Cellular component | actin cytoskeleton |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005925 | Cellular component | focal adhesion |
GO_1990147 | Molecular function | talin binding |
GO_0017166 | Molecular function | vinculin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | CORO2B |
Protein name | Coronin-2B (Coronin-like protein C) (Clipin-C) (Protein FC96) |
Synonyms | KIAA0925 |
Description | FUNCTION: May play a role in the reorganization of neuronal actin structure. |
Accessions | ENST00000540068.6 [Q9UQ03-2] ENST00000543950.3 [Q9UQ03-2] Q9UQ03 ENST00000261861.10 [Q9UQ03-1] |