Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 18 studies | 47% ± 19% | |
epithelial cell | 10 studies | 33% ± 16% | |
basal cell | 6 studies | 27% ± 13% | |
endothelial cell | 6 studies | 22% ± 6% | |
plasmacytoid dendritic cell | 6 studies | 24% ± 6% | |
fibroblast | 5 studies | 22% ± 5% | |
epithelial cell of proximal tubule | 4 studies | 20% ± 3% | |
myofibroblast cell | 4 studies | 16% ± 1% | |
enterocyte | 4 studies | 21% ± 2% | |
natural killer cell | 4 studies | 18% ± 1% | |
deuterosomal cell | 3 studies | 29% ± 5% | |
hematopoietic precursor cell | 3 studies | 19% ± 4% | |
pericyte | 3 studies | 18% ± 3% | |
smooth muscle cell | 3 studies | 17% ± 1% | |
plasma cell | 3 studies | 29% ± 10% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 17% ± 2% | |
type I pneumocyte | 3 studies | 22% ± 6% | |
abnormal cell | 3 studies | 25% ± 4% | |
astrocyte | 3 studies | 25% ± 6% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 2% | |
dendritic cell | 3 studies | 26% ± 4% | |
goblet cell | 3 studies | 24% ± 7% | |
oligodendrocyte | 3 studies | 18% ± 2% | |
neuron | 3 studies | 28% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3248.56 | 1445 / 1445 | 100% | 29.47 | 183 / 183 |
liver | 100% | 3024.56 | 226 / 226 | 100% | 28.47 | 406 / 406 |
ovary | 100% | 3520.43 | 180 / 180 | 100% | 32.77 | 430 / 430 |
pancreas | 100% | 3553.45 | 328 / 328 | 100% | 35.48 | 178 / 178 |
prostate | 100% | 5078.02 | 245 / 245 | 100% | 59.22 | 502 / 502 |
stomach | 100% | 2757.47 | 359 / 359 | 100% | 29.63 | 286 / 286 |
thymus | 100% | 6719.00 | 653 / 653 | 100% | 59.85 | 605 / 605 |
uterus | 100% | 3091.00 | 170 / 170 | 100% | 41.39 | 459 / 459 |
brain | 100% | 3043.00 | 2637 / 2642 | 100% | 34.00 | 705 / 705 |
skin | 100% | 4362.89 | 1809 / 1809 | 100% | 33.43 | 471 / 472 |
kidney | 100% | 5303.00 | 89 / 89 | 100% | 36.99 | 899 / 901 |
breast | 100% | 3049.65 | 459 / 459 | 100% | 40.28 | 1114 / 1118 |
intestine | 100% | 3240.26 | 966 / 966 | 100% | 36.38 | 525 / 527 |
bladder | 100% | 3160.33 | 21 / 21 | 100% | 39.99 | 502 / 504 |
adrenal gland | 100% | 4669.53 | 258 / 258 | 100% | 38.10 | 229 / 230 |
lung | 99% | 2597.31 | 574 / 578 | 100% | 29.53 | 1154 / 1155 |
adipose | 100% | 2242.13 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 50.74 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 41.23 | 29 / 29 |
spleen | 100% | 3332.22 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 42.63 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 72.46 | 1 / 1 |
blood vessel | 99% | 1513.19 | 1323 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1973.58 | 840 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 1259.20 | 778 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 65% | 943.75 | 607 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006744 | Biological process | ubiquinone biosynthetic process |
GO_0031314 | Cellular component | extrinsic component of mitochondrial inner membrane |
GO_0110142 | Cellular component | ubiquinone biosynthesis complex |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0005515 | Molecular function | protein binding |
Gene name | COQ4 |
Protein name | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial (Coenzyme Q biosynthesis protein 4 homolog) Coenzyme Q4 |
Synonyms | CGI-92 |
Description | FUNCTION: Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides. . |
Accessions | V9GY32 ENST00000300452.8 [Q9Y3A0-1] ENST00000372875.3 V9GZ09 ENST00000608951.5 ENST00000609948.1 Q5T4B9 Q9Y3A0 |