Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| glutamatergic neuron | 11 studies | 80% ± 19% | |
| oligodendrocyte | 9 studies | 64% ± 16% | |
| neuron | 8 studies | 64% ± 24% | |
| GABAergic neuron | 8 studies | 84% ± 17% | |
| microglial cell | 8 studies | 53% ± 26% | |
| oligodendrocyte precursor cell | 8 studies | 47% ± 16% | |
| endothelial cell | 7 studies | 51% ± 23% | |
| retina horizontal cell | 7 studies | 82% ± 15% | |
| interneuron | 6 studies | 64% ± 34% | |
| retinal ganglion cell | 6 studies | 67% ± 33% | |
| amacrine cell | 6 studies | 70% ± 23% | |
| astrocyte | 6 studies | 47% ± 29% | |
| fibroblast | 5 studies | 19% ± 4% | |
| granule cell | 4 studies | 71% ± 21% | |
| macrophage | 3 studies | 42% ± 19% | |
| GABAergic amacrine cell | 3 studies | 83% ± 7% | |
| OFF-bipolar cell | 3 studies | 62% ± 15% | |
| ON-bipolar cell | 3 studies | 71% ± 12% | |
| glycinergic amacrine cell | 3 studies | 80% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 99% | 5139.00 | 2628 / 2642 | 74% | 10.01 | 525 / 705 |
| prostate | 72% | 1340.22 | 177 / 245 | 97% | 23.38 | 485 / 502 |
| esophagus | 29% | 217.16 | 412 / 1445 | 49% | 4.58 | 89 / 183 |
| liver | 40% | 220.89 | 90 / 226 | 35% | 2.03 | 144 / 406 |
| intestine | 25% | 113.17 | 241 / 966 | 48% | 3.04 | 253 / 527 |
| breast | 1% | 2.42 | 3 / 459 | 55% | 9.10 | 618 / 1118 |
| adrenal gland | 5% | 24.35 | 12 / 258 | 48% | 7.74 | 110 / 230 |
| stomach | 4% | 17.57 | 15 / 359 | 47% | 3.77 | 133 / 286 |
| ovary | 42% | 279.92 | 75 / 180 | 4% | 0.16 | 17 / 430 |
| tonsil | 0% | 0 | 0 / 0 | 40% | 2.74 | 18 / 45 |
| lung | 0% | 0.64 | 1 / 578 | 39% | 6.00 | 449 / 1155 |
| bladder | 5% | 16.86 | 1 / 21 | 23% | 1.67 | 115 / 504 |
| thymus | 1% | 7.43 | 9 / 653 | 18% | 3.33 | 108 / 605 |
| uterus | 0% | 0 | 0 / 170 | 16% | 1.01 | 73 / 459 |
| pancreas | 1% | 2.88 | 2 / 328 | 14% | 0.77 | 25 / 178 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 0.08 | 1 / 29 |
| kidney | 0% | 0 | 0 / 89 | 3% | 0.22 | 31 / 901 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.27 | 2 / 80 |
| spleen | 2% | 5.64 | 4 / 241 | 0% | 0 | 0 / 0 |
| adipose | 2% | 7.05 | 19 / 1204 | 0% | 0 | 0 / 0 |
| skin | 0% | 1.01 | 4 / 1809 | 1% | 0.04 | 5 / 472 |
| heart | 1% | 4.21 | 9 / 861 | 0% | 0 | 0 / 0 |
| blood vessel | 0% | 1.42 | 4 / 1335 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0.67 | 2 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0021794 | Biological process | thalamus development |
| GO_0045163 | Biological process | clustering of voltage-gated potassium channels |
| GO_0008283 | Biological process | cell population proliferation |
| GO_0042297 | Biological process | vocal learning |
| GO_0007612 | Biological process | learning |
| GO_0031175 | Biological process | neuron projection development |
| GO_0008038 | Biological process | neuron recognition |
| GO_0071109 | Biological process | superior temporal gyrus development |
| GO_0007155 | Biological process | cell adhesion |
| GO_0021756 | Biological process | striatum development |
| GO_0048812 | Biological process | neuron projection morphogenesis |
| GO_1903598 | Biological process | positive regulation of gap junction assembly |
| GO_0071625 | Biological process | vocalization behavior |
| GO_0030534 | Biological process | adult behavior |
| GO_0007420 | Biological process | brain development |
| GO_0019226 | Biological process | transmission of nerve impulse |
| GO_0021987 | Biological process | cerebral cortex development |
| GO_0060134 | Biological process | prepulse inhibition |
| GO_0035176 | Biological process | social behavior |
| GO_0071205 | Biological process | protein localization to juxtaparanode region of axon |
| GO_0021761 | Biological process | limbic system development |
| GO_0016020 | Cellular component | membrane |
| GO_0005769 | Cellular component | early endosome |
| GO_0043204 | Cellular component | perikaryon |
| GO_0097060 | Cellular component | synaptic membrane |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0043025 | Cellular component | neuronal cell body |
| GO_0030425 | Cellular component | dendrite |
| GO_0009986 | Cellular component | cell surface |
| GO_0030673 | Cellular component | axolemma |
| GO_0033010 | Cellular component | paranodal junction |
| GO_0033270 | Cellular component | paranode region of axon |
| GO_0044224 | Cellular component | juxtaparanode region of axon |
| GO_0030424 | Cellular component | axon |
| GO_0008076 | Cellular component | voltage-gated potassium channel complex |
| GO_0019899 | Molecular function | enzyme binding |
| GO_0002020 | Molecular function | protease binding |
| GO_0044325 | Molecular function | transmembrane transporter binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | CNTNAP2 |
| Protein name | Contactin-associated protein 2 Contactin associated protein-like 2 isoform H Contactin-associated protein-like 2 Contactin associated protein 2 (cDNA FLJ53861, highly similar to Contactin-associated protein-like 2) Contactin associated protein-like 2 isoform E Contactin associated protein-like 2 isoform D Contactin associated protein-like 2 isoform C Contactin-associated protein-like 2 (Cell recognition molecule Caspr2) Contactin associated protein-like 2 isoform B Contactin associated protein-like 2 isoform F Contactin associated protein-like 2 isoform G Contactin associated protein 2 Contactin associated protein-like 2 Uncharacterized protein CNTNAP2 |
| Synonyms | KIAA0868 tcag7.496 CASPR2 hCG_15499 |
| Description | FUNCTION: Required for gap junction formation (Probable). Required, with CNTNAP1, for radial and longitudinal organization of myelinated axons. Plays a role in the formation of functional distinct domains critical for saltatory conduction of nerve impulses in myelinated nerve fibers. Demarcates the juxtaparanodal region of the axo-glial junction. . |
| Accessions | ENST00000628930.2 Q86UL6 Q9UHC6 Q86UJ1 X5D8X9 Q75M92 Q75LG9 Q75MD4 X5DQU5 X5D2E8 Q75MF6 Q75MQ9 Q9UDV4 ENST00000613345.2 [Q9UHC6-2] Q86UL9 A0A0J9YYA0 Q86UI8 ENST00000361727.8 [Q9UHC6-1] ENST00000463592.3 [Q9UHC6-2] A0A0D9SES4 ENST00000625365.2 Q75MF8 Q86UL4 X5DNH4 Q75MA1 ENST00000633607.1 Q96T80 A0A090N7T7 Q96T77 B7Z1Y6 X5DRL0 O75852 X5D7C2 X5D9M6 A0A0J9YWG3 Q96T79 Q96T78 ENST00000633544.1 |