CMTM5 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
platelet	9 studies	66% ± 14%	Explore
oligodendrocyte	9 studies	33% ± 15%	Explore
megakaryocyte	6 studies	74% ± 22%	Explore
oligodendrocyte precursor cell	4 studies	24% ± 8%	Explore
glial cell	3 studies	29% ± 18%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	18% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	1970.57	2619 / 2642	98%	64.87	694 / 705
heart	75%	1149.58	650 / 861	0%	0	0 / 0
peripheral blood	65%	418.58	607 / 929	0%	0	0 / 0
skin	0%	2.95	5 / 1809	44%	9.82	209 / 472
intestine	42%	175.80	409 / 966	0%	0.00	1 / 527
muscle	31%	173.22	245 / 803	0%	0	0 / 0
spleen	30%	72.62	73 / 241	0%	0	0 / 0
esophagus	29%	96.89	420 / 1445	0%	0	0 / 183
prostate	22%	70.00	53 / 245	3%	0.09	14 / 502
adrenal gland	2%	3.04	4 / 258	20%	1.45	47 / 230
eye	0%	0	0 / 0	20%	1.69	16 / 80
lung	14%	39.49	81 / 578	1%	0.03	8 / 1155
bladder	14%	28.52	3 / 21	0%	0.01	2 / 504
blood vessel	13%	35.14	170 / 1335	0%	0	0 / 0
uterus	9%	23.65	16 / 170	2%	0.08	11 / 459
stomach	10%	34.88	36 / 359	0%	0	0 / 286
breast	5%	12.40	24 / 459	4%	0.37	44 / 1118
ovary	2%	4.91	3 / 180	3%	0.18	12 / 430
adipose	4%	14.56	51 / 1204	0%	0	0 / 0
pancreas	0%	0	0 / 328	2%	0.12	3 / 178
thymus	0%	0.88	2 / 653	0%	0	0 / 605
kidney	0%	0	0 / 89	0%	0.00	1 / 901
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
liver	0%	0	0 / 226	0%	0	0 / 406
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1