CMTM2 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
neutrophil	8 studies	33% ± 9%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	88%	32.46	2332 / 2642	56%	1.09	393 / 705
lung	100%	169.06	576 / 578	36%	0.84	418 / 1155
kidney	82%	29.53	73 / 89	27%	0.66	246 / 901
thymus	83%	30.92	540 / 653	23%	0.74	141 / 605
spleen	100%	589.85	241 / 241	0%	0	0 / 0
stomach	46%	15.03	165 / 359	49%	1.20	141 / 286
pancreas	20%	4.80	65 / 328	62%	1.59	111 / 178
peripheral blood	82%	3481.56	759 / 929	0%	0	0 / 0
intestine	37%	11.21	362 / 966	43%	1.00	226 / 527
uterus	37%	10.06	63 / 170	33%	0.71	151 / 459
esophagus	20%	7.74	288 / 1445	49%	1.02	90 / 183
liver	57%	20.68	129 / 226	10%	0.20	39 / 406
prostate	58%	36.21	143 / 245	3%	0.05	17 / 502
adipose	59%	30.76	716 / 1204	0%	0	0 / 0
breast	44%	22.82	200 / 459	8%	0.12	93 / 1118
bladder	19%	16.57	4 / 21	32%	0.79	161 / 504
ovary	22%	4.90	39 / 180	11%	0.19	49 / 430
heart	32%	9.75	279 / 861	0%	0	0 / 0
adrenal gland	14%	3.88	37 / 258	16%	0.31	36 / 230
blood vessel	27%	8.97	360 / 1335	0%	0	0 / 0
skin	14%	5.00	262 / 1809	7%	0.14	31 / 472
lymph node	0%	0	0 / 0	17%	0.25	5 / 29
tonsil	0%	0	0 / 0	11%	0.18	5 / 45
muscle	5%	4.86	44 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1