Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 24 studies | 40% ± 15% | |
astrocyte | 18 studies | 39% ± 21% | |
fibroblast | 12 studies | 32% ± 12% | |
pericyte | 11 studies | 29% ± 11% | |
glutamatergic neuron | 10 studies | 52% ± 22% | |
smooth muscle cell | 9 studies | 28% ± 11% | |
adipocyte | 8 studies | 31% ± 10% | |
endothelial cell of lymphatic vessel | 8 studies | 44% ± 14% | |
GABAergic neuron | 7 studies | 50% ± 18% | |
retinal rod cell | 7 studies | 55% ± 33% | |
ciliated cell | 7 studies | 36% ± 21% | |
interneuron | 6 studies | 51% ± 24% | |
neuron | 5 studies | 42% ± 24% | |
type I pneumocyte | 5 studies | 26% ± 2% | |
type II pneumocyte | 5 studies | 40% ± 3% | |
granule cell | 4 studies | 54% ± 15% | |
microglial cell | 4 studies | 60% ± 13% | |
oligodendrocyte precursor cell | 4 studies | 24% ± 7% | |
retinal bipolar neuron | 4 studies | 43% ± 28% | |
cardiac muscle cell | 4 studies | 26% ± 4% | |
retinal cone cell | 4 studies | 51% ± 15% | |
club cell | 4 studies | 27% ± 9% | |
GABAergic interneuron | 3 studies | 39% ± 12% | |
mesothelial cell | 3 studies | 40% ± 13% | |
vein endothelial cell | 3 studies | 47% ± 26% | |
Mueller cell | 3 studies | 44% ± 11% | |
retinal ganglion cell | 3 studies | 37% ± 11% | |
rod bipolar cell | 3 studies | 65% ± 31% | |
endothelial cell of vascular tree | 3 studies | 50% ± 14% | |
connective tissue cell | 3 studies | 30% ± 8% | |
ependymal cell | 3 studies | 65% ± 8% | |
capillary endothelial cell | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 1206.56 | 244 / 245 | 98% | 3.53 | 491 / 502 |
thymus | 100% | 1213.11 | 652 / 653 | 96% | 4.84 | 581 / 605 |
pancreas | 98% | 426.83 | 320 / 328 | 96% | 3.89 | 171 / 178 |
kidney | 100% | 842.72 | 89 / 89 | 93% | 5.35 | 839 / 901 |
adrenal gland | 98% | 466.98 | 252 / 258 | 90% | 3.53 | 207 / 230 |
lung | 100% | 1166.73 | 577 / 578 | 87% | 3.69 | 1008 / 1155 |
breast | 100% | 1649.92 | 459 / 459 | 86% | 2.45 | 959 / 1118 |
brain | 97% | 470.01 | 2570 / 2642 | 88% | 2.93 | 617 / 705 |
ovary | 100% | 1095.26 | 180 / 180 | 79% | 1.89 | 340 / 430 |
esophagus | 93% | 972.61 | 1341 / 1445 | 74% | 2.02 | 135 / 183 |
uterus | 99% | 1438.38 | 169 / 170 | 67% | 2.45 | 307 / 459 |
bladder | 100% | 910.38 | 21 / 21 | 64% | 1.86 | 323 / 504 |
skin | 90% | 480.95 | 1631 / 1809 | 72% | 3.07 | 340 / 472 |
intestine | 91% | 899.52 | 876 / 966 | 71% | 1.67 | 375 / 527 |
stomach | 81% | 600.77 | 292 / 359 | 69% | 1.78 | 198 / 286 |
adipose | 100% | 1935.36 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1168.53 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 998.42 | 241 / 241 | 0% | 0 | 0 / 0 |
muscle | 100% | 720.95 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 791.25 | 851 / 861 | 0% | 0 | 0 / 0 |
liver | 29% | 82.07 | 66 / 226 | 55% | 1.28 | 222 / 406 |
tonsil | 0% | 0 | 0 / 0 | 51% | 1.11 | 23 / 45 |
eye | 0% | 0 | 0 / 0 | 40% | 0.76 | 32 / 80 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.38 | 7 / 29 |
peripheral blood | 0% | 1.15 | 4 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0097120 | Biological process | receptor localization to synapse |
GO_0005813 | Cellular component | centrosome |
GO_0060077 | Cellular component | inhibitory synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | CEP112 |
Protein name | Centrosomal protein 112 Centrosomal protein of 112 kDa (Cep112) (Coiled-coil domain-containing protein 46) |
Synonyms | CCDC46 |
Description | |
Accessions | ENST00000535342.7 [Q8N8E3-1] ENST00000585168.1 A0A9L9PXV5 ENST00000706794.1 ENST00000706793.1 J3QQV3 ENST00000392769.6 [Q8N8E3-1] ENST00000537949.5 A0A9L9PXX9 Q8N8E3 A0A9L9PYC3 J3KSN4 ENST00000706792.1 A0A9L9PXI6 ENST00000581734.5 F5GYE8 A0A9L9PXB5 ENST00000706795.1 ENST00000583358.1 J3QL98 J3QSA5 A0A9L9PYC7 ENST00000706791.1 ENST00000317442.12 [Q8N8E3-2] J3QRD9 ENST00000706790.1 ENST00000581739.5 ENST00000577322.1 |