Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| oligodendrocyte | 6 studies | 20% ± 4% | |
| neuron | 4 studies | 20% ± 4% | |
| glutamatergic neuron | 4 studies | 37% ± 11% | |
| epithelial cell | 3 studies | 23% ± 5% | |
| basal cell | 3 studies | 39% ± 26% | |
| GABAergic neuron | 3 studies | 32% ± 5% | |
| oligodendrocyte precursor cell | 3 studies | 23% ± 7% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 30% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 10590.80 | 2629 / 2642 | 99% | 63.44 | 695 / 705 |
| thymus | 100% | 7853.98 | 652 / 653 | 89% | 38.34 | 539 / 605 |
| esophagus | 93% | 5299.87 | 1343 / 1445 | 86% | 52.51 | 157 / 183 |
| kidney | 96% | 3461.85 | 85 / 89 | 78% | 20.95 | 701 / 901 |
| skin | 72% | 10213.89 | 1305 / 1809 | 91% | 37.71 | 429 / 472 |
| breast | 58% | 2513.33 | 264 / 459 | 93% | 51.66 | 1039 / 1118 |
| prostate | 89% | 2778.46 | 217 / 245 | 47% | 5.62 | 235 / 502 |
| uterus | 48% | 1245.64 | 82 / 170 | 85% | 35.76 | 388 / 459 |
| bladder | 57% | 1099.67 | 12 / 21 | 49% | 11.72 | 246 / 504 |
| ovary | 4% | 68.83 | 7 / 180 | 98% | 59.69 | 422 / 430 |
| eye | 0% | 0 | 0 / 0 | 100% | 59.85 | 80 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 58.42 | 45 / 45 |
| stomach | 48% | 886.54 | 172 / 359 | 42% | 7.12 | 119 / 286 |
| intestine | 59% | 1373.78 | 566 / 966 | 28% | 4.56 | 148 / 527 |
| muscle | 82% | 1865.08 | 660 / 803 | 0% | 0 | 0 / 0 |
| adrenal gland | 23% | 384.18 | 59 / 258 | 50% | 9.32 | 114 / 230 |
| lung | 14% | 219.29 | 83 / 578 | 53% | 15.09 | 609 / 1155 |
| heart | 53% | 1668.08 | 456 / 861 | 0% | 0 | 0 / 0 |
| pancreas | 26% | 444.19 | 85 / 328 | 17% | 2.73 | 31 / 178 |
| liver | 7% | 116.85 | 16 / 226 | 8% | 1.20 | 32 / 406 |
| blood vessel | 13% | 221.99 | 167 / 1335 | 0% | 0 | 0 / 0 |
| adipose | 8% | 135.12 | 92 / 1204 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0060271 | Biological process | cilium assembly |
| GO_0022407 | Biological process | regulation of cell-cell adhesion |
| GO_0048813 | Biological process | dendrite morphogenesis |
| GO_0032880 | Biological process | regulation of protein localization |
| GO_0097475 | Biological process | motor neuron migration |
| GO_0021591 | Biological process | ventricular system development |
| GO_0007186 | Biological process | G protein-coupled receptor signaling pathway |
| GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO_0006355 | Biological process | regulation of DNA-templated transcription |
| GO_0003341 | Biological process | cilium movement |
| GO_0060071 | Biological process | Wnt signaling pathway, planar cell polarity pathway |
| GO_0033326 | Biological process | cerebrospinal fluid secretion |
| GO_0016055 | Biological process | Wnt signaling pathway |
| GO_0098609 | Biological process | cell-cell adhesion |
| GO_0021999 | Biological process | neural plate anterior/posterior regionalization |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0016020 | Cellular component | membrane |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0004930 | Molecular function | G protein-coupled receptor activity |
| GO_0005509 | Molecular function | calcium ion binding |
| Gene name | CELSR2 |
| Protein name | Cadherin EGF LAG seven-pass G-type receptor 2 (Cadherin family member 10) (Epidermal growth factor-like protein 2) (EGF-like protein 2) (Flamingo homolog 3) (Multiple epidermal growth factor-like domains protein 3) (Multiple EGF-like domains protein 3) |
| Synonyms | MEGF3 EGFL2 CDHF10 KIAA0279 |
| Description | FUNCTION: Receptor that may have an important role in cell/cell signaling during nervous system formation. |
| Accessions | Q9HCU4 ENST00000271332.4 |