Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 10 studies | 32% ± 12% | |
alveolar macrophage | 7 studies | 42% ± 15% |
Insufficient scRNA-seq data for expression of CCL18 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 5638.86 | 576 / 578 | 89% | 222.54 | 1031 / 1155 |
intestine | 53% | 337.10 | 515 / 966 | 55% | 64.84 | 292 / 527 |
esophagus | 51% | 268.54 | 740 / 1445 | 56% | 49.10 | 102 / 183 |
thymus | 36% | 133.85 | 238 / 653 | 61% | 57.03 | 370 / 605 |
lymph node | 0% | 0 | 0 / 0 | 97% | 553.67 | 28 / 29 |
spleen | 89% | 470.15 | 215 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 150.35 | 37 / 45 |
skin | 16% | 41.04 | 290 / 1809 | 58% | 54.19 | 272 / 472 |
pancreas | 2% | 1.90 | 5 / 328 | 72% | 75.99 | 128 / 178 |
bladder | 19% | 76.71 | 4 / 21 | 53% | 65.66 | 268 / 504 |
breast | 46% | 168.23 | 212 / 459 | 26% | 17.98 | 288 / 1118 |
stomach | 11% | 18.25 | 40 / 359 | 58% | 70.69 | 166 / 286 |
adipose | 61% | 428.67 | 732 / 1204 | 0% | 0 | 0 / 0 |
kidney | 6% | 29.62 | 5 / 89 | 42% | 66.31 | 375 / 901 |
uterus | 2% | 3.72 | 3 / 170 | 40% | 40.15 | 182 / 459 |
blood vessel | 37% | 432.67 | 490 / 1335 | 0% | 0 | 0 / 0 |
heart | 32% | 118.48 | 275 / 861 | 0% | 0 | 0 / 0 |
liver | 11% | 19.91 | 24 / 226 | 15% | 5.88 | 62 / 406 |
eye | 0% | 0 | 0 / 0 | 25% | 11.47 | 20 / 80 |
prostate | 7% | 20.53 | 17 / 245 | 16% | 5.56 | 80 / 502 |
ovary | 8% | 30.22 | 14 / 180 | 12% | 7.80 | 52 / 430 |
adrenal gland | 12% | 21.81 | 32 / 258 | 7% | 5.44 | 17 / 230 |
peripheral blood | 12% | 47.26 | 111 / 929 | 0% | 0 | 0 / 0 |
brain | 0% | 3.75 | 13 / 2642 | 5% | 11.97 | 36 / 705 |
muscle | 2% | 2.40 | 17 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007154 | Biological process | cell communication |
GO_0007165 | Biological process | signal transduction |
GO_0006955 | Biological process | immune response |
GO_0061844 | Biological process | antimicrobial humoral immune response mediated by antimicrobial peptide |
GO_0070098 | Biological process | chemokine-mediated signaling pathway |
GO_0006954 | Biological process | inflammatory response |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0006935 | Biological process | chemotaxis |
GO_0043547 | Biological process | positive regulation of GTPase activity |
GO_0007267 | Biological process | cell-cell signaling |
GO_0048245 | Biological process | eosinophil chemotaxis |
GO_0005615 | Cellular component | extracellular space |
GO_0048020 | Molecular function | CCR chemokine receptor binding |
GO_0005515 | Molecular function | protein binding |
GO_0008009 | Molecular function | chemokine activity |
Gene name | CCL18 |
Protein name | C-C motif chemokine 18 (Alternative macrophage activation-associated CC chemokine 1) (AMAC-1) (CC chemokine PARC) (Dendritic cell chemokine 1) (DC-CK1) (Macrophage inflammatory protein 4) (MIP-4) (Pulmonary and activation-regulated chemokine) (Small-inducible cytokine A18) [Cleaved into: CCL18(1-68); CCL18(3-69); CCL18(4-69)] |
Synonyms | AMAC1 PARC DCCK1 MIP4 SCYA18 |
Description | FUNCTION: Chemotactic factor that attracts lymphocytes but not monocytes or granulocytes. May be involved in B-cell migration into B-cell follicles in lymph nodes. Attracts naive T-lymphocytes toward dendritic cells and activated macrophages in lymph nodes, has chemotactic activity for naive T-cells, CD4+ and CD8+ T-cells and thus may play a role in both humoral and cell-mediated immunity responses. . |
Accessions | ENST00000616054.2 ENST00000615723.2 ENST00000614828.2 P55774 |