Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 41 studies | 34% ± 12% | |
B cell | 30 studies | 32% ± 10% | |
plasmacytoid dendritic cell | 28 studies | 79% ± 16% | |
memory B cell | 20 studies | 33% ± 6% | |
fibroblast | 18 studies | 22% ± 7% | |
macrophage | 17 studies | 26% ± 7% | |
endothelial cell of lymphatic vessel | 16 studies | 29% ± 10% | |
oligodendrocyte precursor cell | 16 studies | 54% ± 24% | |
capillary endothelial cell | 15 studies | 24% ± 8% | |
pericyte | 13 studies | 20% ± 6% | |
vein endothelial cell | 13 studies | 32% ± 13% | |
endothelial cell of vascular tree | 13 studies | 29% ± 11% | |
smooth muscle cell | 12 studies | 18% ± 4% | |
naive B cell | 12 studies | 23% ± 7% | |
endothelial cell of artery | 12 studies | 26% ± 6% | |
microglial cell | 12 studies | 31% ± 11% | |
conventional dendritic cell | 10 studies | 31% ± 11% | |
dendritic cell | 9 studies | 34% ± 14% | |
plasma cell | 8 studies | 33% ± 15% | |
epithelial cell | 7 studies | 34% ± 17% | |
astrocyte | 6 studies | 30% ± 11% | |
plasmablast | 5 studies | 34% ± 15% | |
GABAergic neuron | 5 studies | 40% ± 8% | |
neuron | 5 studies | 25% ± 9% | |
precursor B cell | 5 studies | 24% ± 4% | |
immature B cell | 5 studies | 30% ± 9% | |
ciliated cell | 5 studies | 28% ± 18% | |
basal cell | 5 studies | 28% ± 13% | |
glutamatergic neuron | 5 studies | 33% ± 15% | |
interneuron | 5 studies | 34% ± 18% | |
oligodendrocyte | 5 studies | 23% ± 5% | |
leukocyte | 4 studies | 21% ± 2% | |
myofibroblast cell | 4 studies | 18% ± 3% | |
type I pneumocyte | 4 studies | 20% ± 3% | |
adipocyte | 4 studies | 27% ± 6% | |
abnormal cell | 4 studies | 31% ± 9% | |
hepatocyte | 4 studies | 46% ± 22% | |
classical monocyte | 3 studies | 25% ± 3% | |
hematopoietic precursor cell | 3 studies | 22% ± 7% | |
glomerular endothelial cell | 3 studies | 29% ± 2% | |
myeloid cell | 3 studies | 32% ± 11% | |
endothelial cell of sinusoid | 3 studies | 38% ± 16% | |
pancreatic ductal cell | 3 studies | 47% ± 19% | |
connective tissue cell | 3 studies | 19% ± 0% | |
enteroendocrine cell | 3 studies | 21% ± 8% | |
goblet cell | 3 studies | 31% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 6060.58 | 89 / 89 | 100% | 47.33 | 900 / 901 |
prostate | 100% | 6490.36 | 245 / 245 | 100% | 31.18 | 500 / 502 |
pancreas | 100% | 4428.87 | 328 / 328 | 99% | 31.52 | 177 / 178 |
breast | 100% | 9870.19 | 459 / 459 | 99% | 25.53 | 1111 / 1118 |
liver | 100% | 4835.64 | 226 / 226 | 99% | 26.70 | 403 / 406 |
thymus | 100% | 7778.71 | 653 / 653 | 99% | 26.71 | 600 / 605 |
ovary | 100% | 8550.84 | 180 / 180 | 99% | 24.81 | 426 / 430 |
brain | 99% | 2896.19 | 2617 / 2642 | 100% | 43.50 | 705 / 705 |
lung | 100% | 8059.71 | 578 / 578 | 99% | 23.99 | 1138 / 1155 |
esophagus | 100% | 6905.14 | 1444 / 1445 | 98% | 28.90 | 180 / 183 |
uterus | 100% | 8502.66 | 170 / 170 | 98% | 26.59 | 450 / 459 |
stomach | 100% | 5315.19 | 359 / 359 | 98% | 21.54 | 280 / 286 |
skin | 100% | 5503.77 | 1807 / 1809 | 98% | 69.32 | 461 / 472 |
bladder | 100% | 7413.24 | 21 / 21 | 97% | 20.54 | 490 / 504 |
intestine | 100% | 7863.00 | 966 / 966 | 97% | 19.04 | 512 / 527 |
adrenal gland | 100% | 5044.96 | 258 / 258 | 93% | 16.06 | 214 / 230 |
adipose | 100% | 11234.48 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9179.50 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 7765.31 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 27.31 | 45 / 45 |
heart | 99% | 4179.68 | 854 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 3142.95 | 794 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 32.10 | 79 / 80 |
lymph node | 0% | 0 | 0 / 0 | 90% | 27.60 | 26 / 29 |
peripheral blood | 28% | 2835.81 | 257 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007605 | Biological process | sensory perception of sound |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CCDC50 |
Protein name | Coiled-coil domain-containing protein 50 (Protein Ymer) |
Synonyms | C3orf6 |
Description | FUNCTION: Involved in EGFR signaling. . |
Accessions | ENST00000392455.9 [Q8IVM0-2] ENST00000392456.4 [Q8IVM0-1] Q8IVM0 |