Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 18 studies | 45% ± 15% | |
astrocyte | 11 studies | 34% ± 17% | |
retinal cone cell | 9 studies | 78% ± 17% | |
retinal rod cell | 8 studies | 40% ± 18% | |
oligodendrocyte precursor cell | 7 studies | 32% ± 15% | |
GABAergic neuron | 6 studies | 39% ± 20% | |
endothelial cell | 5 studies | 33% ± 14% | |
interneuron | 5 studies | 42% ± 23% | |
deuterosomal cell | 4 studies | 19% ± 3% | |
epithelial cell | 4 studies | 20% ± 1% | |
adipocyte | 4 studies | 26% ± 6% | |
fibroblast | 4 studies | 26% ± 14% | |
glutamatergic neuron | 4 studies | 48% ± 15% | |
ependymal cell | 3 studies | 39% ± 11% | |
pericyte | 3 studies | 21% ± 7% | |
smooth muscle cell | 3 studies | 24% ± 4% | |
neuron | 3 studies | 24% ± 6% | |
oligodendrocyte | 3 studies | 27% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 790.13 | 2612 / 2642 | 100% | 9.98 | 703 / 705 |
ovary | 100% | 1251.07 | 180 / 180 | 98% | 3.94 | 422 / 430 |
kidney | 100% | 1315.79 | 89 / 89 | 97% | 7.85 | 873 / 901 |
prostate | 98% | 1173.27 | 240 / 245 | 99% | 4.95 | 495 / 502 |
breast | 99% | 1069.45 | 456 / 459 | 97% | 4.06 | 1085 / 1118 |
adrenal gland | 98% | 1183.59 | 254 / 258 | 97% | 5.48 | 222 / 230 |
lung | 98% | 1156.54 | 565 / 578 | 96% | 3.88 | 1112 / 1155 |
thymus | 99% | 1052.97 | 646 / 653 | 95% | 3.97 | 573 / 605 |
esophagus | 96% | 1433.95 | 1389 / 1445 | 92% | 2.91 | 169 / 183 |
bladder | 100% | 1712.81 | 21 / 21 | 84% | 2.55 | 425 / 504 |
skin | 85% | 788.51 | 1536 / 1809 | 99% | 6.93 | 465 / 472 |
uterus | 100% | 1832.72 | 170 / 170 | 80% | 2.94 | 365 / 459 |
intestine | 97% | 1807.74 | 937 / 966 | 73% | 1.90 | 383 / 527 |
stomach | 91% | 1094.51 | 326 / 359 | 76% | 2.36 | 217 / 286 |
pancreas | 46% | 163.87 | 151 / 328 | 97% | 3.70 | 172 / 178 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.64 | 1 / 1 |
blood vessel | 100% | 2223.94 | 1334 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1090.11 | 1198 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 6.68 | 79 / 80 |
heart | 87% | 567.27 | 745 / 861 | 0% | 0 | 0 / 0 |
spleen | 84% | 383.23 | 203 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 62% | 1.39 | 28 / 45 |
liver | 18% | 54.18 | 40 / 226 | 35% | 0.85 | 141 / 406 |
muscle | 25% | 88.87 | 204 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 1.94 | 3 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1905515 | Biological process | non-motile cilium assembly |
GO_0060271 | Biological process | cilium assembly |
GO_0043010 | Biological process | camera-type eye development |
GO_1990403 | Biological process | embryonic brain development |
GO_0001822 | Biological process | kidney development |
GO_0007224 | Biological process | smoothened signaling pathway |
GO_0001843 | Biological process | neural tube closure |
GO_0007507 | Biological process | heart development |
GO_0007368 | Biological process | determination of left/right symmetry |
GO_0035082 | Biological process | axoneme assembly |
GO_1904491 | Biological process | protein localization to ciliary transition zone |
GO_0044458 | Biological process | motile cilium assembly |
GO_0005856 | Cellular component | cytoskeleton |
GO_0036038 | Cellular component | MKS complex |
GO_0005829 | Cellular component | cytosol |
GO_0035869 | Cellular component | ciliary transition zone |
Gene name | CC2D2A |
Protein name | Coiled-coil and C2 domain-containing protein 2A Coiled-coil and C2 domain containing 2A Alternative protein CC2D2A |
Synonyms | KIAA1345 |
Description | FUNCTION: Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling (By similarity). . |
Accessions | ENST00000507954.5 [Q9P2K1-6] A0A6Q8PG12 A0A140T8Y7 ENST00000515124.6 [Q9P2K1-6] ENST00000503292.6 [Q9P2K1-4] A0A0M3HER0 D6R9V3 ENST00000676337.1 L8EC73 A0A6Q8PHJ7 ENST00000652443.1 ENST00000511544.6 ENST00000650860.2 ENST00000424120.6 [Q9P2K1-4] ENST00000506643.5 H0Y941 ENST00000503658.2 [Q9P2K1-5] A0A494C0X1 A0A494C1C5 A0A0J9YY35 ENST00000634028.2 ENST00000514039.6 Q9P2K1 A0A0J9YXT3 ENST00000674945.1 [Q9P2K1-2] ENST00000514450.3 ENST00000389652.11 ENST00000651385.1 ENST00000512702.6 |