Insufficient scRNA-seq data for expression of CATSPER1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 85.77 | 572 / 578 | 41% | 1.92 | 473 / 1155 |
skin | 84% | 42.49 | 1513 / 1809 | 30% | 0.82 | 141 / 472 |
bladder | 57% | 18.48 | 12 / 21 | 45% | 3.03 | 227 / 504 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.26 | 1 / 1 |
pancreas | 15% | 3.57 | 49 / 328 | 82% | 3.26 | 146 / 178 |
spleen | 96% | 51.57 | 231 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 93% | 75.94 | 1245 / 1335 | 0% | 0 | 0 / 0 |
thymus | 30% | 6.01 | 196 / 653 | 63% | 3.62 | 380 / 605 |
peripheral blood | 82% | 209.31 | 764 / 929 | 0% | 0 | 0 / 0 |
kidney | 45% | 11.12 | 40 / 89 | 29% | 0.80 | 261 / 901 |
adipose | 70% | 20.79 | 843 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 58% | 13.23 | 149 / 258 | 10% | 0.36 | 22 / 230 |
uterus | 39% | 7.44 | 66 / 170 | 25% | 1.00 | 116 / 459 |
breast | 41% | 10.35 | 189 / 459 | 23% | 0.46 | 254 / 1118 |
prostate | 54% | 13.40 | 133 / 245 | 1% | 0.01 | 4 / 502 |
stomach | 37% | 7.20 | 132 / 359 | 15% | 0.32 | 44 / 286 |
intestine | 35% | 6.49 | 336 / 966 | 17% | 0.45 | 89 / 527 |
brain | 37% | 9.46 | 986 / 2642 | 14% | 0.27 | 101 / 705 |
esophagus | 40% | 8.86 | 575 / 1445 | 10% | 0.35 | 19 / 183 |
ovary | 13% | 2.16 | 23 / 180 | 20% | 0.37 | 87 / 430 |
lymph node | 0% | 0 | 0 / 0 | 31% | 0.55 | 9 / 29 |
heart | 24% | 4.76 | 210 / 861 | 0% | 0 | 0 / 0 |
liver | 8% | 1.76 | 18 / 226 | 6% | 0.15 | 23 / 406 |
muscle | 13% | 2.50 | 105 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.12 | 4 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060296 | Biological process | regulation of cilium beat frequency involved in ciliary motility |
GO_0007283 | Biological process | spermatogenesis |
GO_0030317 | Biological process | flagellated sperm motility |
GO_0030154 | Biological process | cell differentiation |
GO_0006816 | Biological process | calcium ion transport |
GO_0070588 | Biological process | calcium ion transmembrane transport |
GO_0097228 | Cellular component | sperm principal piece |
GO_0036128 | Cellular component | CatSper complex |
GO_0036126 | Cellular component | sperm flagellum |
GO_0005886 | Cellular component | plasma membrane |
GO_0005245 | Molecular function | voltage-gated calcium channel activity |
GO_0005515 | Molecular function | protein binding |
GO_0005227 | Molecular function | calcium-activated cation channel activity |
Gene name | CATSPER1 |
Protein name | Cation channel sperm-associated protein 1 (CatSper1) (hCatSper) |
Synonyms | |
Description | FUNCTION: Voltage-gated calcium channel that plays a central role in calcium-dependent physiological responses essential for successful fertilization, such as sperm hyperactivation, acrosome reaction and chemotaxis towards the oocyte. . |
Accessions | Q8NEC5 ENST00000312106.6 |