Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 26 studies | 32% ± 14% | |
astrocyte | 17 studies | 39% ± 18% | |
oligodendrocyte precursor cell | 16 studies | 53% ± 19% | |
glutamatergic neuron | 13 studies | 56% ± 23% | |
fibroblast | 12 studies | 26% ± 8% | |
oligodendrocyte | 12 studies | 40% ± 12% | |
GABAergic neuron | 11 studies | 55% ± 21% | |
pericyte | 11 studies | 27% ± 13% | |
microglial cell | 11 studies | 33% ± 11% | |
endothelial cell of lymphatic vessel | 7 studies | 35% ± 12% | |
neuron | 7 studies | 50% ± 16% | |
interneuron | 7 studies | 60% ± 22% | |
macrophage | 7 studies | 30% ± 11% | |
retinal ganglion cell | 7 studies | 42% ± 14% | |
adipocyte | 7 studies | 22% ± 6% | |
smooth muscle cell | 7 studies | 27% ± 6% | |
type I pneumocyte | 6 studies | 25% ± 8% | |
basal cell | 6 studies | 30% ± 24% | |
amacrine cell | 6 studies | 34% ± 10% | |
retina horizontal cell | 6 studies | 30% ± 13% | |
Mueller cell | 6 studies | 30% ± 9% | |
epithelial cell | 5 studies | 35% ± 17% | |
type II pneumocyte | 5 studies | 23% ± 6% | |
granule cell | 4 studies | 43% ± 6% | |
retinal pigment epithelial cell | 4 studies | 40% ± 18% | |
cardiac muscle cell | 4 studies | 18% ± 3% | |
mesothelial cell | 4 studies | 33% ± 8% | |
vein endothelial cell | 4 studies | 32% ± 16% | |
OFF-bipolar cell | 4 studies | 32% ± 11% | |
ON-bipolar cell | 4 studies | 27% ± 8% | |
club cell | 4 studies | 23% ± 8% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 56% ± 14% | |
GABAergic interneuron | 3 studies | 54% ± 2% | |
glial cell | 3 studies | 25% ± 10% | |
progenitor cell | 3 studies | 30% ± 2% | |
endothelial cell of artery | 3 studies | 19% ± 2% | |
retinal bipolar neuron | 3 studies | 27% ± 8% | |
GABAergic amacrine cell | 3 studies | 42% ± 8% | |
glycinergic amacrine cell | 3 studies | 36% ± 7% | |
rod bipolar cell | 3 studies | 27% ± 8% | |
capillary endothelial cell | 3 studies | 24% ± 2% | |
endothelial cell of vascular tree | 3 studies | 34% ± 17% | |
abnormal cell | 3 studies | 30% ± 13% | |
neural progenitor cell | 3 studies | 30% ± 6% | |
connective tissue cell | 3 studies | 27% ± 1% | |
ependymal cell | 3 studies | 34% ± 20% | |
alveolar macrophage | 3 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 5635.13 | 2641 / 2642 | 100% | 63.32 | 703 / 705 |
esophagus | 100% | 3220.98 | 1444 / 1445 | 99% | 38.26 | 182 / 183 |
breast | 100% | 4063.80 | 459 / 459 | 99% | 34.47 | 1107 / 1118 |
lung | 100% | 3706.34 | 577 / 578 | 99% | 28.96 | 1145 / 1155 |
uterus | 100% | 4545.34 | 170 / 170 | 99% | 25.57 | 453 / 459 |
prostate | 100% | 2942.49 | 245 / 245 | 98% | 19.08 | 494 / 502 |
ovary | 100% | 4494.47 | 180 / 180 | 98% | 17.32 | 422 / 430 |
adrenal gland | 100% | 4581.19 | 258 / 258 | 98% | 23.17 | 225 / 230 |
kidney | 100% | 2159.88 | 89 / 89 | 97% | 23.23 | 870 / 901 |
thymus | 100% | 3945.45 | 653 / 653 | 97% | 26.91 | 584 / 605 |
skin | 100% | 4572.64 | 1808 / 1809 | 95% | 33.56 | 450 / 472 |
bladder | 100% | 3429.81 | 21 / 21 | 92% | 19.46 | 466 / 504 |
stomach | 99% | 1979.57 | 354 / 359 | 91% | 14.98 | 260 / 286 |
intestine | 94% | 2559.41 | 910 / 966 | 80% | 11.63 | 420 / 527 |
pancreas | 51% | 505.95 | 167 / 328 | 97% | 20.26 | 173 / 178 |
liver | 62% | 732.24 | 139 / 226 | 59% | 8.73 | 240 / 406 |
blood vessel | 100% | 5016.01 | 1335 / 1335 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 16.18 | 1 / 1 |
adipose | 100% | 4631.58 | 1203 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 1460.65 | 236 / 241 | 0% | 0 | 0 / 0 |
muscle | 97% | 1574.86 | 779 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 1942.22 | 832 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 20.94 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 71% | 11.16 | 57 / 80 |
peripheral blood | 19% | 517.81 | 172 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 1.17 | 3 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1903358 | Biological process | regulation of Golgi organization |
GO_0061564 | Biological process | axon development |
GO_0031122 | Biological process | cytoplasmic microtubule organization |
GO_0007026 | Biological process | negative regulation of microtubule depolymerization |
GO_0031113 | Biological process | regulation of microtubule polymerization |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0050773 | Biological process | regulation of dendrite development |
GO_0033043 | Biological process | regulation of organelle organization |
GO_0005813 | Cellular component | centrosome |
GO_0036449 | Cellular component | microtubule minus-end |
GO_0036064 | Cellular component | ciliary basal body |
GO_0005829 | Cellular component | cytosol |
GO_0005794 | Cellular component | Golgi apparatus |
GO_1990752 | Cellular component | microtubule end |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
GO_0051011 | Molecular function | microtubule minus-end binding |
GO_0030507 | Molecular function | spectrin binding |
Gene name | CAMSAP2 |
Protein name | Calmodulin-regulated spectrin-associated protein 2 (Calmodulin-regulated spectrin-associated protein 1-like protein 1) Calmodulin regulated spectrin associated protein family member 2 |
Synonyms | CAMSAP1L1 KIAA1078 |
Description | FUNCTION: Key microtubule-organizing protein that specifically binds the minus-end of non-centrosomal microtubules and regulates their dynamics and organization . Specifically recognizes growing microtubule minus-ends and autonomously decorates and stabilizes microtubule lattice formed by microtubule minus-end polymerization . Acts on free microtubule minus-ends that are not capped by microtubule-nucleating proteins or other factors and protects microtubule minus-ends from depolymerization . In addition, it also reduces the velocity of microtubule polymerization . Through the microtubule cytoskeleton, also regulates the organization of cellular organelles including the Golgi and the early endosomes . Essential for the tethering, but not for nucleation of non-centrosomal microtubules at the Golgi: together with Golgi-associated proteins AKAP9 and PDE4DIP, required to tether non-centrosomal minus-end microtubules to the Golgi, an important step for polarized cell movement . Also acts as a regulator of neuronal polarity and development: localizes to non-centrosomal microtubule minus-ends in neurons and stabilizes non-centrosomal microtubules, which is required for neuronal polarity, axon specification and dendritic branch formation . Through the microtubule cytoskeleton, regulates the autophagosome transport . . |
Accessions | Q08AD1 ENST00000358823.7 [Q08AD1-3] ENST00000413307.6 [Q08AD1-2] ENST00000447701.2 ENST00000236925.8 [Q08AD1-1] ENST00000475326.1 H0Y4Z1 H0YE13 |