BNIP1 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of BNIP1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	397.76	1445 / 1445	100%	8.63	183 / 183
pancreas	100%	429.43	328 / 328	100%	12.06	178 / 178
prostate	100%	496.29	245 / 245	100%	16.00	502 / 502
stomach	100%	417.40	359 / 359	100%	10.26	286 / 286
kidney	100%	546.28	89 / 89	100%	11.08	900 / 901
brain	100%	437.12	2638 / 2642	100%	17.46	705 / 705
thymus	100%	532.94	653 / 653	100%	14.41	604 / 605
uterus	100%	417.00	170 / 170	100%	15.44	458 / 459
lung	100%	475.64	577 / 578	100%	12.78	1154 / 1155
skin	100%	504.41	1807 / 1809	100%	11.60	471 / 472
breast	100%	465.52	459 / 459	100%	15.23	1114 / 1118
intestine	100%	424.78	966 / 966	100%	12.55	525 / 527
adrenal gland	100%	618.40	258 / 258	100%	16.02	229 / 230
bladder	100%	404.14	21 / 21	99%	13.31	501 / 504
ovary	100%	419.89	180 / 180	99%	9.18	427 / 430
liver	100%	334.25	226 / 226	99%	10.02	402 / 406
adipose	100%	447.55	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	21.22	29 / 29
spleen	100%	514.30	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	13.29	45 / 45
ureter	0%	0	0 / 0	100%	5.95	1 / 1
blood vessel	100%	341.24	1330 / 1335	0%	0	0 / 0
muscle	100%	395.33	799 / 803	0%	0	0 / 0
heart	99%	378.88	855 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	95%	9.74	76 / 80
peripheral blood	81%	318.16	749 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_0006890	Biological process	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO_0019722	Biological process	calcium-mediated signaling
GO_0007029	Biological process	endoplasmic reticulum organization
GO_0016320	Biological process	endoplasmic reticulum membrane fusion
GO_0043066	Biological process	negative regulation of apoptotic process
GO_0097194	Biological process	execution phase of apoptosis
GO_0006915	Biological process	apoptotic process
GO_0140208	Biological process	apoptotic process in response to mitochondrial fragmentation
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0031966	Cellular component	mitochondrial membrane
GO_0005635	Cellular component	nuclear envelope
GO_0005783	Cellular component	endoplasmic reticulum
GO_0005737	Cellular component	cytoplasm
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0005741	Cellular component	mitochondrial outer membrane
GO_0031201	Cellular component	SNARE complex
GO_0048763	Molecular function	calcium-induced calcium release activity
GO_0005484	Molecular function	SNAP receptor activity
GO_0005515	Molecular function	protein binding

Gene name	BNIP1
Protein name	Vesicle transport protein SEC20 (BCL2/adenovirus E1B 19 kDa protein-interacting protein 1) (Transformation-related gene 8 protein) (TRG-8) BCL2 interacting protein 1
Synonyms	NIP1 SEC20L TRG8
Description	FUNCTION: As part of a SNARE complex may be involved in endoplasmic reticulum membranes fusion and be required for the maintenance of endoplasmic reticulum organization . Also plays a role in apoptosis . It is for instance required for endoplasmic reticulum stress-induced apoptosis . As a substrate of RNF185 interacting with SQSTM1, might also be involved in mitochondrial autophagy (Probable). .
Accessions	ENST00000352523.10 [Q12981-3] ENST00000393770.4 [Q12981-2] Q12981 ENST00000519459.2 H0YBK7 ENST00000351486.10 [Q12981-4] ENST00000231668.13 [Q12981-1]

BNIP1 report