Name | Number of supported studies | Average coverage | |
---|---|---|---|
naive B cell | 14 studies | 23% ± 6% | |
B cell | 13 studies | 29% ± 8% | |
plasmacytoid dendritic cell | 12 studies | 27% ± 8% | |
precursor B cell | 5 studies | 58% ± 7% | |
pro-B cell | 5 studies | 34% ± 7% | |
glutamatergic neuron | 5 studies | 33% ± 12% | |
epithelial cell | 4 studies | 28% ± 5% | |
ciliated cell | 4 studies | 25% ± 9% | |
immature B cell | 4 studies | 53% ± 13% | |
GABAergic neuron | 4 studies | 29% ± 9% | |
abnormal cell | 3 studies | 23% ± 0% | |
endothelial cell | 3 studies | 25% ± 5% | |
amacrine cell | 3 studies | 30% ± 10% | |
retina horizontal cell | 3 studies | 27% ± 6% | |
germinal center B cell | 3 studies | 36% ± 5% | |
astrocyte | 3 studies | 17% ± 1% | |
interneuron | 3 studies | 31% ± 15% | |
neuron | 3 studies | 31% ± 10% | |
oligodendrocyte | 3 studies | 17% ± 1% | |
oligodendrocyte precursor cell | 3 studies | 24% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 25% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 1678.41 | 653 / 653 | 100% | 28.83 | 603 / 605 |
prostate | 100% | 1175.23 | 245 / 245 | 98% | 13.59 | 493 / 502 |
pancreas | 100% | 1133.91 | 328 / 328 | 98% | 11.24 | 174 / 178 |
brain | 100% | 2216.14 | 2640 / 2642 | 97% | 33.19 | 687 / 705 |
kidney | 100% | 1637.47 | 89 / 89 | 97% | 17.14 | 872 / 901 |
bladder | 100% | 1047.52 | 21 / 21 | 96% | 14.16 | 486 / 504 |
lung | 99% | 897.34 | 574 / 578 | 97% | 15.13 | 1119 / 1155 |
ovary | 100% | 644.16 | 180 / 180 | 95% | 15.14 | 409 / 430 |
esophagus | 99% | 595.42 | 1435 / 1445 | 96% | 15.66 | 175 / 183 |
breast | 97% | 912.29 | 443 / 459 | 98% | 16.75 | 1100 / 1118 |
intestine | 99% | 805.55 | 959 / 966 | 95% | 11.76 | 503 / 527 |
stomach | 99% | 650.82 | 354 / 359 | 96% | 12.29 | 274 / 286 |
uterus | 99% | 887.33 | 168 / 170 | 94% | 14.08 | 432 / 459 |
skin | 99% | 1299.48 | 1796 / 1809 | 90% | 13.36 | 426 / 472 |
adrenal gland | 98% | 551.12 | 254 / 258 | 87% | 9.96 | 201 / 230 |
liver | 100% | 628.37 | 226 / 226 | 78% | 8.55 | 318 / 406 |
spleen | 100% | 807.29 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.57 | 1 / 1 |
muscle | 100% | 1294.88 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1131.48 | 1330 / 1335 | 0% | 0 | 0 / 0 |
adipose | 97% | 585.71 | 1163 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1133.41 | 831 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 12.93 | 77 / 80 |
tonsil | 0% | 0 | 0 / 0 | 93% | 12.69 | 42 / 45 |
lymph node | 0% | 0 | 0 / 0 | 90% | 38.95 | 26 / 29 |
peripheral blood | 32% | 278.18 | 293 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006338 | Biological process | chromatin remodeling |
GO_0045596 | Biological process | negative regulation of cell differentiation |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0070316 | Biological process | regulation of G0 to G1 transition |
GO_1902459 | Biological process | positive regulation of stem cell population maintenance |
GO_2000045 | Biological process | regulation of G1/S transition of mitotic cell cycle |
GO_0030071 | Biological process | regulation of mitotic metaphase/anaphase transition |
GO_2000781 | Biological process | positive regulation of double-strand break repair |
GO_2000819 | Biological process | regulation of nucleotide-excision repair |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0140288 | Cellular component | GBAF complex |
GO_0016514 | Cellular component | SWI/SNF complex |
GO_0000785 | Cellular component | chromatin |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | BCL7A |
Protein name | B-cell CLL/lymphoma 7 protein family member A |
Synonyms | |
Description | |
Accessions | ENST00000261822.5 [Q4VC05-1] Q4VC05 ENST00000538010.5 [Q4VC05-2] |