Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 36% ± 17% | |
astrocyte | 12 studies | 40% ± 18% | |
microglial cell | 12 studies | 35% ± 15% | |
macrophage | 11 studies | 35% ± 16% | |
oligodendrocyte | 10 studies | 32% ± 13% | |
GABAergic neuron | 9 studies | 42% ± 22% | |
glutamatergic neuron | 9 studies | 48% ± 24% | |
oligodendrocyte precursor cell | 9 studies | 37% ± 18% | |
adipocyte | 9 studies | 23% ± 6% | |
fibroblast | 9 studies | 29% ± 10% | |
epithelial cell | 8 studies | 31% ± 12% | |
pericyte | 7 studies | 29% ± 15% | |
interneuron | 6 studies | 48% ± 21% | |
B cell | 6 studies | 20% ± 6% | |
myeloid cell | 6 studies | 28% ± 8% | |
ciliated cell | 6 studies | 22% ± 6% | |
endothelial cell of lymphatic vessel | 6 studies | 34% ± 13% | |
neuron | 5 studies | 45% ± 15% | |
dendritic cell | 5 studies | 24% ± 3% | |
monocyte | 5 studies | 36% ± 15% | |
club cell | 5 studies | 23% ± 7% | |
smooth muscle cell | 5 studies | 22% ± 2% | |
type I pneumocyte | 5 studies | 29% ± 12% | |
type II pneumocyte | 5 studies | 27% ± 11% | |
cardiac muscle cell | 4 studies | 19% ± 1% | |
mast cell | 4 studies | 23% ± 4% | |
T cell | 4 studies | 28% ± 11% | |
classical monocyte | 3 studies | 19% ± 3% | |
GABAergic interneuron | 3 studies | 38% ± 12% | |
granule cell | 3 studies | 30% ± 3% | |
retinal ganglion cell | 3 studies | 27% ± 10% | |
Mueller cell | 3 studies | 26% ± 7% | |
retinal cone cell | 3 studies | 21% ± 7% | |
retinal rod cell | 3 studies | 22% ± 3% | |
endothelial cell of vascular tree | 3 studies | 28% ± 16% | |
hepatocyte | 3 studies | 44% ± 22% | |
abnormal cell | 3 studies | 34% ± 11% | |
ependymal cell | 3 studies | 40% ± 24% | |
respiratory goblet cell | 3 studies | 28% ± 8% | |
alveolar macrophage | 3 studies | 38% ± 12% | |
lymphocyte | 3 studies | 32% ± 7% | |
basal cell | 3 studies | 35% ± 18% | |
goblet cell | 3 studies | 37% ± 22% | |
mucus secreting cell | 3 studies | 25% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2276.73 | 1445 / 1445 | 100% | 17.59 | 183 / 183 |
intestine | 100% | 3010.57 | 966 / 966 | 100% | 23.33 | 527 / 527 |
stomach | 100% | 2156.67 | 359 / 359 | 100% | 22.83 | 286 / 286 |
lung | 100% | 2598.85 | 578 / 578 | 100% | 16.54 | 1154 / 1155 |
ovary | 100% | 2505.72 | 180 / 180 | 100% | 10.63 | 429 / 430 |
brain | 100% | 2816.54 | 2639 / 2642 | 100% | 15.03 | 703 / 705 |
prostate | 100% | 2548.54 | 245 / 245 | 100% | 17.54 | 500 / 502 |
breast | 100% | 2636.64 | 459 / 459 | 100% | 20.17 | 1113 / 1118 |
bladder | 100% | 2633.86 | 21 / 21 | 99% | 15.81 | 500 / 504 |
thymus | 100% | 2964.83 | 653 / 653 | 99% | 12.39 | 597 / 605 |
pancreas | 100% | 1771.48 | 327 / 328 | 99% | 13.08 | 176 / 178 |
kidney | 100% | 2095.03 | 89 / 89 | 97% | 11.03 | 878 / 901 |
uterus | 100% | 2554.69 | 170 / 170 | 97% | 10.23 | 447 / 459 |
adrenal gland | 100% | 2929.46 | 258 / 258 | 96% | 8.98 | 221 / 230 |
skin | 100% | 2775.57 | 1809 / 1809 | 96% | 11.84 | 452 / 472 |
liver | 100% | 1300.26 | 226 / 226 | 90% | 6.62 | 365 / 406 |
adipose | 100% | 2469.75 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.94 | 29 / 29 |
spleen | 100% | 2812.41 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.91 | 1 / 1 |
blood vessel | 100% | 2057.54 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1578.47 | 800 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1144.45 | 840 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 2315.83 | 901 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 8.19 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 81% | 5.58 | 65 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016477 | Biological process | cell migration |
GO_0055037 | Cellular component | recycling endosome |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
Gene name | AVL9 |
Protein name | AVL9 cell migration associated AVL9 protein Alternative protein AVL9 Late secretory pathway protein AVL9 homolog |
Synonyms | KIAA0241 |
Description | FUNCTION: Functions in cell migration. . |
Accessions | ENST00000318709.9 [Q8NBF6-1] ENST00000446718.1 L8E8M3 Q8NBF6 ENST00000409301.5 Q8N6Z3 H7C0I1 B8ZZW5 |