Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 15 studies | 28% ± 12% | |
astrocyte | 13 studies | 33% ± 14% | |
microglial cell | 11 studies | 29% ± 11% | |
glutamatergic neuron | 10 studies | 49% ± 24% | |
macrophage | 10 studies | 31% ± 13% | |
adipocyte | 9 studies | 34% ± 8% | |
fibroblast | 9 studies | 25% ± 8% | |
GABAergic neuron | 8 studies | 48% ± 22% | |
oligodendrocyte | 8 studies | 27% ± 10% | |
interneuron | 6 studies | 46% ± 14% | |
smooth muscle cell | 6 studies | 20% ± 4% | |
neuron | 5 studies | 42% ± 15% | |
epithelial cell | 5 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 5 studies | 23% ± 5% | |
pericyte | 5 studies | 32% ± 12% | |
type II pneumocyte | 5 studies | 24% ± 7% | |
granule cell | 4 studies | 40% ± 6% | |
dendritic cell | 4 studies | 19% ± 2% | |
ciliated cell | 4 studies | 25% ± 7% | |
amacrine cell | 4 studies | 25% ± 8% | |
myeloid cell | 4 studies | 30% ± 6% | |
monocyte | 4 studies | 27% ± 7% | |
GABAergic interneuron | 3 studies | 32% ± 4% | |
mast cell | 3 studies | 23% ± 6% | |
hepatocyte | 3 studies | 42% ± 22% | |
ependymal cell | 3 studies | 35% ± 14% | |
T cell | 3 studies | 19% ± 2% | |
alveolar macrophage | 3 studies | 30% ± 7% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 0% | |
natural killer cell | 3 studies | 19% ± 4% | |
lymphocyte | 3 studies | 24% ± 1% | |
cardiac muscle cell | 3 studies | 21% ± 1% | |
mucus secreting cell | 3 studies | 24% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 662.58 | 1445 / 1445 | 100% | 6.30 | 183 / 183 |
skin | 100% | 986.69 | 1808 / 1809 | 100% | 5.05 | 471 / 472 |
stomach | 100% | 619.81 | 359 / 359 | 100% | 4.79 | 285 / 286 |
breast | 100% | 908.57 | 459 / 459 | 100% | 5.19 | 1114 / 1118 |
intestine | 100% | 907.10 | 966 / 966 | 100% | 4.39 | 525 / 527 |
prostate | 100% | 906.00 | 245 / 245 | 100% | 4.85 | 500 / 502 |
ovary | 100% | 887.79 | 180 / 180 | 100% | 4.52 | 428 / 430 |
kidney | 100% | 852.69 | 89 / 89 | 99% | 5.34 | 891 / 901 |
thymus | 100% | 1057.40 | 653 / 653 | 99% | 3.90 | 597 / 605 |
lung | 100% | 646.06 | 577 / 578 | 98% | 4.12 | 1136 / 1155 |
uterus | 100% | 788.73 | 170 / 170 | 97% | 3.08 | 447 / 459 |
bladder | 100% | 813.67 | 21 / 21 | 96% | 3.14 | 486 / 504 |
pancreas | 97% | 296.55 | 318 / 328 | 98% | 3.71 | 174 / 178 |
brain | 95% | 484.01 | 2514 / 2642 | 99% | 4.08 | 695 / 705 |
adrenal gland | 100% | 718.30 | 257 / 258 | 90% | 2.56 | 207 / 230 |
liver | 98% | 573.10 | 221 / 226 | 87% | 2.45 | 353 / 406 |
adipose | 100% | 862.34 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 736.43 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 544.92 | 1334 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 3.83 | 44 / 45 |
peripheral blood | 95% | 497.10 | 878 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 3.27 | 74 / 80 |
heart | 92% | 276.82 | 793 / 861 | 0% | 0 | 0 / 0 |
muscle | 84% | 199.15 | 673 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 2.98 | 24 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005515 | Molecular function | protein binding |
Gene name | ATXN7L1 |
Protein name | Ataxin-7-like protein 1 (Ataxin-7-like protein 4) Ataxin 7 like 1 ATXN7L1 protein |
Synonyms | ATXN7L4 KIAA1218 |
Description | |
Accessions | ENST00000419735.8 [Q9ULK2-1] Q9BTQ8 Q9ULK2 F8WDE7 ENST00000474433.5 ENST00000484475.5 ENST00000318724.8 [Q9ULK2-2] ENST00000477775.5 [Q9ULK2-3] H0Y8A2 C9IZF2 ENST00000472195.1 ENST00000478915.1 C9K0V9 |