Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 12 studies | 29% ± 12% | |
| astrocyte | 12 studies | 32% ± 16% | |
| glutamatergic neuron | 11 studies | 43% ± 27% | |
| microglial cell | 11 studies | 34% ± 12% | |
| oligodendrocyte precursor cell | 11 studies | 32% ± 13% | |
| GABAergic neuron | 10 studies | 40% ± 25% | |
| macrophage | 10 studies | 41% ± 18% | |
| oligodendrocyte | 10 studies | 29% ± 11% | |
| adipocyte | 8 studies | 24% ± 5% | |
| interneuron | 6 studies | 47% ± 25% | |
| fibroblast | 6 studies | 23% ± 5% | |
| neuron | 5 studies | 47% ± 22% | |
| epithelial cell | 5 studies | 29% ± 13% | |
| type I pneumocyte | 5 studies | 24% ± 7% | |
| granule cell | 4 studies | 26% ± 7% | |
| cardiac muscle cell | 4 studies | 22% ± 1% | |
| dendritic cell | 4 studies | 21% ± 3% | |
| retina horizontal cell | 4 studies | 25% ± 6% | |
| myeloid cell | 4 studies | 33% ± 6% | |
| endothelial cell of lymphatic vessel | 4 studies | 20% ± 2% | |
| monocyte | 4 studies | 25% ± 6% | |
| pericyte | 4 studies | 20% ± 4% | |
| smooth muscle cell | 4 studies | 18% ± 2% | |
| GABAergic interneuron | 3 studies | 32% ± 6% | |
| amacrine cell | 3 studies | 24% ± 5% | |
| glycinergic amacrine cell | 3 studies | 19% ± 2% | |
| retinal cone cell | 3 studies | 21% ± 7% | |
| retinal rod cell | 3 studies | 22% ± 4% | |
| hepatocyte | 3 studies | 64% ± 20% | |
| alveolar macrophage | 3 studies | 27% ± 8% | |
| club cell | 3 studies | 21% ± 7% | |
| type II pneumocyte | 3 studies | 20% ± 6% | |
| lymphocyte | 3 studies | 20% ± 4% | |
| basal cell | 3 studies | 30% ± 17% | |
| kidney distal convoluted tubule epithelial cell | 3 studies | 22% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| breast | 100% | 3777.88 | 459 / 459 | 100% | 43.11 | 1116 / 1118 |
| brain | 100% | 4555.00 | 2638 / 2642 | 100% | 50.65 | 703 / 705 |
| ovary | 100% | 3463.88 | 180 / 180 | 100% | 35.28 | 428 / 430 |
| esophagus | 100% | 2682.07 | 1445 / 1445 | 99% | 50.26 | 182 / 183 |
| lung | 100% | 3263.11 | 578 / 578 | 99% | 40.08 | 1147 / 1155 |
| prostate | 100% | 2836.72 | 245 / 245 | 99% | 32.31 | 497 / 502 |
| liver | 100% | 4808.84 | 226 / 226 | 99% | 67.55 | 401 / 406 |
| skin | 100% | 5115.31 | 1809 / 1809 | 99% | 45.46 | 466 / 472 |
| pancreas | 100% | 3353.87 | 327 / 328 | 99% | 27.76 | 176 / 178 |
| thymus | 100% | 5192.85 | 653 / 653 | 98% | 44.85 | 595 / 605 |
| adrenal gland | 100% | 6645.78 | 258 / 258 | 98% | 37.03 | 225 / 230 |
| uterus | 100% | 3497.05 | 170 / 170 | 97% | 28.68 | 447 / 459 |
| kidney | 100% | 3435.67 | 89 / 89 | 97% | 32.88 | 877 / 901 |
| bladder | 100% | 3090.33 | 21 / 21 | 97% | 29.00 | 489 / 504 |
| stomach | 100% | 4263.30 | 359 / 359 | 95% | 30.92 | 272 / 286 |
| intestine | 100% | 3146.78 | 966 / 966 | 90% | 20.96 | 474 / 527 |
| adipose | 100% | 3579.93 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| spleen | 100% | 3022.38 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 28.02 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 14.07 | 1 / 1 |
| muscle | 100% | 2413.37 | 802 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 3131.48 | 1333 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 98% | 29.53 | 78 / 80 |
| heart | 97% | 2996.14 | 834 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 72% | 8.71 | 21 / 29 |
| peripheral blood | 40% | 548.57 | 367 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0021549 | Biological process | cerebellum development |
| GO_0006954 | Biological process | inflammatory response |
| GO_0040014 | Biological process | regulation of multicellular organism growth |
| GO_0043473 | Biological process | pigmentation |
| GO_0042552 | Biological process | myelination |
| GO_0005615 | Cellular component | extracellular space |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0038023 | Molecular function | signaling receptor activity |
| GO_0030246 | Molecular function | carbohydrate binding |
| Gene name | ATRN |
| Protein name | Attractin (DPPT-L) (Mahogany homolog) |
| Synonyms | MGCA KIAA0548 |
| Description | FUNCTION: Involved in the initial immune cell clustering during inflammatory response and may regulate chemotactic activity of chemokines. May play a role in melanocortin signaling pathways that regulate energy homeostasis and hair color. Low-affinity receptor for agouti (By similarity). Has a critical role in normal myelination in the central nervous system (By similarity). . |
| Accessions | ENST00000262919.10 [O75882-1] ENST00000446916.2 [O75882-2] O75882 |