Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 15 studies | 26% ± 9% | |
astrocyte | 10 studies | 34% ± 18% | |
adipocyte | 8 studies | 34% ± 19% | |
microglial cell | 6 studies | 23% ± 4% | |
glutamatergic neuron | 6 studies | 45% ± 24% | |
epithelial cell | 5 studies | 37% ± 16% | |
GABAergic neuron | 5 studies | 41% ± 19% | |
club cell | 5 studies | 34% ± 13% | |
ciliated cell | 5 studies | 22% ± 8% | |
smooth muscle cell | 5 studies | 20% ± 5% | |
type II pneumocyte | 5 studies | 28% ± 8% | |
oligodendrocyte precursor cell | 4 studies | 28% ± 9% | |
fibroblast | 4 studies | 24% ± 10% | |
type I pneumocyte | 4 studies | 22% ± 7% | |
basal cell | 4 studies | 34% ± 21% | |
goblet cell | 4 studies | 31% ± 26% | |
interneuron | 4 studies | 43% ± 21% | |
neuron | 3 studies | 22% ± 6% | |
hepatocyte | 3 studies | 38% ± 15% | |
endothelial cell of lymphatic vessel | 3 studies | 22% ± 4% | |
macrophage | 3 studies | 29% ± 9% | |
transit amplifying cell | 3 studies | 38% ± 29% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 6518.84 | 1445 / 1445 | 100% | 55.69 | 183 / 183 |
ovary | 100% | 4736.73 | 180 / 180 | 100% | 44.32 | 430 / 430 |
breast | 100% | 3472.64 | 459 / 459 | 100% | 44.47 | 1114 / 1118 |
prostate | 100% | 3472.11 | 245 / 245 | 100% | 33.46 | 500 / 502 |
thymus | 100% | 5160.78 | 653 / 653 | 99% | 74.09 | 601 / 605 |
lung | 99% | 2534.34 | 573 / 578 | 100% | 54.48 | 1155 / 1155 |
uterus | 100% | 4517.12 | 170 / 170 | 99% | 42.19 | 454 / 459 |
intestine | 100% | 5582.14 | 966 / 966 | 98% | 32.57 | 518 / 527 |
liver | 100% | 2953.81 | 226 / 226 | 98% | 25.52 | 399 / 406 |
stomach | 100% | 3874.08 | 359 / 359 | 98% | 32.06 | 281 / 286 |
bladder | 100% | 3793.14 | 21 / 21 | 98% | 36.58 | 494 / 504 |
kidney | 100% | 1836.67 | 89 / 89 | 97% | 24.65 | 870 / 901 |
adrenal gland | 100% | 3755.45 | 258 / 258 | 96% | 24.67 | 221 / 230 |
skin | 100% | 5354.72 | 1809 / 1809 | 93% | 26.93 | 438 / 472 |
pancreas | 94% | 1214.45 | 307 / 328 | 98% | 27.76 | 175 / 178 |
brain | 91% | 1754.01 | 2395 / 2642 | 98% | 17.91 | 691 / 705 |
muscle | 100% | 4181.47 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2914.90 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.10 | 1 / 1 |
adipose | 100% | 2611.14 | 1202 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2760.59 | 1332 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 51.89 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 93% | 15.76 | 27 / 29 |
heart | 90% | 1443.46 | 777 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 65% | 11.37 | 52 / 80 |
peripheral blood | 38% | 846.87 | 356 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1990809 | Biological process | endoplasmic reticulum tubular network membrane organization |
GO_0007029 | Biological process | endoplasmic reticulum organization |
GO_0051260 | Biological process | protein homooligomerization |
GO_0007030 | Biological process | Golgi organization |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0098826 | Cellular component | endoplasmic reticulum tubular network membrane |
GO_0016020 | Cellular component | membrane |
GO_0005525 | Molecular function | GTP binding |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | ATL2 |
Protein name | Atlastin GTPase 2 Atlastin-2 (EC 3.6.5.-) (ADP-ribosylation factor-like protein 6-interacting protein 2) (ARL-6-interacting protein 2) (Aip-2) |
Synonyms | ARL6IP2 |
Description | FUNCTION: GTPase tethering membranes through formation of trans-homooligomers and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis . . |
Accessions | ENST00000451483.1 ENST00000443098.5 ENST00000419554.6 [Q8NHH9-2] C9JC25 ENST00000405384.6 ENST00000449130.5 ENST00000402054.5 [Q8NHH9-3] ENST00000456736.5 ENST00000378954.9 [Q8NHH9-1] ENST00000651368.1 [Q8NHH9-3] H7C3A2 F8WBH0 ENST00000452935.6 [Q8NHH9-5] B5MCN0 F8WD17 C9JQQ5 ENST00000629272.2 ENST00000406122.5 Q8NHH9 F8WEN4 ENST00000416222.1 |