Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 13 studies | 34% ± 13% | |
oligodendrocyte precursor cell | 7 studies | 25% ± 10% | |
neuron | 6 studies | 30% ± 11% | |
glutamatergic neuron | 6 studies | 36% ± 20% | |
interneuron | 5 studies | 26% ± 14% | |
GABAergic neuron | 5 studies | 33% ± 14% | |
amacrine cell | 3 studies | 21% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 7 studies | 29% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 14002.35 | 2641 / 2642 | 100% | 110.38 | 703 / 705 |
adrenal gland | 6% | 140.56 | 16 / 258 | 74% | 12.78 | 171 / 230 |
skin | 0% | 0 | 0 / 1809 | 68% | 2.00 | 321 / 472 |
esophagus | 0% | 1.70 | 2 / 1445 | 67% | 1.44 | 123 / 183 |
eye | 0% | 0 | 0 / 0 | 59% | 1.44 | 47 / 80 |
stomach | 0% | 0 | 0 / 359 | 48% | 0.88 | 137 / 286 |
prostate | 0% | 0 | 0 / 245 | 40% | 0.58 | 199 / 502 |
tonsil | 0% | 0 | 0 / 0 | 38% | 0.86 | 17 / 45 |
intestine | 2% | 23.24 | 15 / 966 | 33% | 0.58 | 175 / 527 |
uterus | 0% | 0 | 0 / 170 | 31% | 0.70 | 141 / 459 |
lung | 0% | 0 | 0 / 578 | 29% | 0.51 | 336 / 1155 |
kidney | 0% | 0 | 0 / 89 | 28% | 0.45 | 252 / 901 |
ovary | 0% | 0 | 0 / 180 | 24% | 0.38 | 104 / 430 |
breast | 0% | 0 | 0 / 459 | 23% | 0.37 | 260 / 1118 |
liver | 0% | 0 | 0 / 226 | 22% | 0.33 | 89 / 406 |
bladder | 0% | 0 | 0 / 21 | 17% | 0.30 | 87 / 504 |
pancreas | 0% | 0 | 0 / 328 | 15% | 0.45 | 27 / 178 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.18 | 4 / 29 |
thymus | 0% | 0 | 0 / 653 | 13% | 0.16 | 76 / 605 |
blood vessel | 0% | 1.41 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
adipose | 0% | 0 | 0 / 1204 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0001708 | Biological process | cell fate specification |
GO_0090630 | Biological process | activation of GTPase activity |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_0007026 | Biological process | negative regulation of microtubule depolymerization |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0007399 | Biological process | nervous system development |
GO_0016477 | Biological process | cell migration |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0007389 | Biological process | pattern specification process |
GO_0030496 | Cellular component | midbody |
GO_0031941 | Cellular component | filamentous actin |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0098794 | Cellular component | postsynapse |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016342 | Cellular component | catenin complex |
GO_0030877 | Cellular component | beta-catenin destruction complex |
GO_0005884 | Cellular component | actin filament |
GO_0045171 | Cellular component | intercellular bridge |
GO_0031258 | Cellular component | lamellipodium membrane |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005881 | Cellular component | cytoplasmic microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0008013 | Molecular function | beta-catenin binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0045295 | Molecular function | gamma-catenin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | APC2 |
Protein name | Adenomatous polyposis coli protein 2 (Adenomatous polyposis coli protein-like) (APC-like) Adenomatous polyposis coli protein 2 APC2 protein APC regulator of WNT signaling pathway 2 |
Synonyms | APCL |
Description | FUNCTION: Stabilizes microtubules and may regulate actin fiber dynamics through the activation of Rho family GTPases . May also function in Wnt signaling by promoting the rapid degradation of CTNNB1 . . |
Accessions | ENST00000590877.5 ENST00000590469 Q9UNL8 ENST00000238483.5 K7ERC5 O95996 K7EN62 ENST00000590469.6 [O95996-1] ENST00000587869.5 K7ELQ3 ENST00000587149.6 ENST00000535453.5 [O95996-1] ENST00000233607.6 [O95996-1] A0A0C4DGQ0 B5MDS5 |