Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 29 studies | 33% ± 15% | |
microglial cell | 13 studies | 41% ± 14% | |
myeloid cell | 12 studies | 32% ± 10% | |
B cell | 11 studies | 20% ± 4% | |
naive B cell | 10 studies | 22% ± 4% | |
classical monocyte | 8 studies | 24% ± 6% | |
endothelial cell | 7 studies | 24% ± 5% | |
dendritic cell | 7 studies | 26% ± 13% | |
non-classical monocyte | 6 studies | 20% ± 5% | |
epithelial cell | 6 studies | 27% ± 9% | |
conventional dendritic cell | 5 studies | 26% ± 8% | |
glutamatergic neuron | 5 studies | 36% ± 19% | |
monocyte | 5 studies | 26% ± 9% | |
GABAergic neuron | 5 studies | 30% ± 15% | |
neuron | 4 studies | 23% ± 8% | |
memory B cell | 4 studies | 16% ± 1% | |
precursor B cell | 4 studies | 29% ± 7% | |
pro-B cell | 4 studies | 27% ± 10% | |
immature B cell | 4 studies | 20% ± 2% | |
astrocyte | 4 studies | 29% ± 6% | |
leukocyte | 3 studies | 32% ± 15% | |
retinal cone cell | 3 studies | 23% ± 3% | |
mononuclear phagocyte | 3 studies | 28% ± 14% | |
tissue-resident macrophage | 3 studies | 33% ± 4% | |
intermediate monocyte | 3 studies | 28% ± 7% | |
alveolar macrophage | 3 studies | 24% ± 5% | |
basal cell | 3 studies | 21% ± 2% | |
transit amplifying cell | 3 studies | 22% ± 4% | |
interneuron | 3 studies | 32% ± 20% | |
abnormal cell | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7372.70 | 1445 / 1445 | 100% | 86.36 | 183 / 183 |
pancreas | 100% | 4284.43 | 328 / 328 | 100% | 73.51 | 178 / 178 |
thymus | 100% | 6576.43 | 653 / 653 | 100% | 66.18 | 605 / 605 |
uterus | 100% | 4667.54 | 170 / 170 | 100% | 75.67 | 459 / 459 |
brain | 100% | 6801.93 | 2641 / 2642 | 100% | 107.17 | 705 / 705 |
prostate | 100% | 8837.22 | 245 / 245 | 100% | 131.04 | 501 / 502 |
skin | 100% | 7915.68 | 1809 / 1809 | 100% | 91.64 | 471 / 472 |
lung | 100% | 6689.97 | 578 / 578 | 100% | 81.04 | 1151 / 1155 |
kidney | 100% | 6340.89 | 89 / 89 | 100% | 66.54 | 897 / 901 |
breast | 100% | 5653.62 | 459 / 459 | 99% | 80.04 | 1112 / 1118 |
intestine | 100% | 6767.95 | 966 / 966 | 99% | 69.86 | 524 / 527 |
stomach | 100% | 6227.99 | 359 / 359 | 99% | 72.23 | 284 / 286 |
liver | 100% | 4061.22 | 226 / 226 | 99% | 43.79 | 403 / 406 |
bladder | 100% | 6061.71 | 21 / 21 | 99% | 100.29 | 500 / 504 |
adrenal gland | 100% | 9331.74 | 258 / 258 | 98% | 55.57 | 225 / 230 |
ovary | 100% | 3594.38 | 180 / 180 | 98% | 51.58 | 420 / 430 |
adipose | 100% | 5810.49 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 69.35 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 143.80 | 29 / 29 |
spleen | 100% | 12300.93 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 90.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 79.94 | 1 / 1 |
blood vessel | 100% | 4801.86 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 3060.48 | 796 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 5299.48 | 911 / 929 | 0% | 0 | 0 / 0 |
heart | 97% | 3207.72 | 833 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007507 | Biological process | heart development |
GO_0007368 | Biological process | determination of left/right symmetry |
GO_0001822 | Biological process | kidney development |
GO_0006886 | Biological process | intracellular protein transport |
GO_0016192 | Biological process | vesicle-mediated transport |
GO_0060155 | Biological process | platelet dense granule organization |
GO_0110010 | Biological process | basolateral protein secretion |
GO_1903232 | Biological process | melanosome assembly |
GO_0005769 | Cellular component | early endosome |
GO_0030121 | Cellular component | AP-1 adaptor complex |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005829 | Cellular component | cytosol |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0019901 | Molecular function | protein kinase binding |
GO_0030276 | Molecular function | clathrin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | AP1B1 |
Protein name | AP-1 complex subunit beta-1 (Adaptor protein complex AP-1 subunit beta-1) (Adaptor-related protein complex 1 subunit beta-1) (Beta-1-adaptin) (Beta-adaptin 1) (Clathrin assembly protein complex 1 beta large chain) (Golgi adaptor HA1/AP1 adaptin beta subunit) Adaptor related protein complex 1 subunit beta 1 |
Synonyms | CLAPB2 ADTB1 BAM22 |
Description | FUNCTION: Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes . The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. . |
Accessions | ENST00000317368.11 [Q10567-4] H7C034 Q10567 ENST00000432560.6 [Q10567-3] C9J1E7 ENST00000405198.6 [Q10567-3] ENST00000415756.1 ENST00000421126.5 ENST00000357586.7 [Q10567-1] |