AMIGO1 | OmnibusX

Name	Number of supported studies	Average coverage
GABAergic neuron	3 studies	21% ± 3%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of AMIGO1 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	99%	1187.46	243 / 245	100%	18.02	502 / 502
thymus	100%	1134.76	650 / 653	98%	14.66	591 / 605
brain	99%	3206.42	2613 / 2642	98%	23.58	693 / 705
adrenal gland	100%	2538.47	258 / 258	97%	21.24	222 / 230
kidney	98%	772.96	87 / 89	94%	15.93	851 / 901
breast	95%	707.43	437 / 459	89%	9.12	999 / 1118
pancreas	99%	745.63	325 / 328	84%	6.75	150 / 178
intestine	97%	1246.66	935 / 966	79%	4.88	416 / 527
ovary	100%	1342.40	180 / 180	76%	5.18	325 / 430
stomach	97%	924.68	347 / 359	76%	5.46	217 / 286
lung	92%	753.14	530 / 578	76%	6.04	883 / 1155
uterus	98%	1128.91	167 / 170	67%	4.82	306 / 459
bladder	100%	950.29	21 / 21	63%	4.18	318 / 504
esophagus	87%	1028.02	1256 / 1445	70%	4.70	129 / 183
skin	63%	358.72	1141 / 1809	63%	5.21	295 / 472
liver	59%	282.79	134 / 226	56%	3.50	228 / 406
ureter	0%	0	0 / 0	100%	4.47	1 / 1
muscle	100%	1736.14	801 / 803	0%	0	0 / 0
blood vessel	99%	983.44	1322 / 1335	0%	0	0 / 0
spleen	99%	626.53	238 / 241	0%	0	0 / 0
heart	94%	1112.35	806 / 861	0%	0	0 / 0
adipose	90%	618.88	1080 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	81%	6.61	65 / 80
tonsil	0%	0	0 / 0	60%	3.67	27 / 45
lymph node	0%	0	0 / 0	28%	1.18	8 / 29
peripheral blood	22%	101.87	205 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

GO_1901381	Biological process	positive regulation of potassium ion transmembrane transport
GO_0050772	Biological process	positive regulation of axonogenesis
GO_0042552	Biological process	myelination
GO_0010976	Biological process	positive regulation of neuron projection development
GO_0007409	Biological process	axonogenesis
GO_0007413	Biological process	axonal fasciculation
GO_0007156	Biological process	homophilic cell adhesion via plasma membrane adhesion molecules
GO_0007420	Biological process	brain development
GO_1905232	Biological process	cellular response to L-glutamate
GO_0051965	Biological process	positive regulation of synapse assembly
GO_0007157	Biological process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO_0016020	Cellular component	membrane
GO_0043204	Cellular component	perikaryon
GO_0032809	Cellular component	neuronal cell body membrane
GO_0030425	Cellular component	dendrite
GO_1990030	Cellular component	pericellular basket
GO_0008076	Cellular component	voltage-gated potassium channel complex
GO_0015459	Molecular function	potassium channel regulator activity
GO_0005515	Molecular function	protein binding

Gene name	AMIGO1
Protein name	Amphoterin-induced protein 1 (AMIGO-1) (Alivin-2)
Synonyms	AMIGO ALI2 KIAA1163
Description	FUNCTION: Promotes growth and fasciculation of neurites from cultured hippocampal neurons. May be involved in fasciculation as well as myelination of developing neural axons. May have a role in regeneration as well as neural plasticity in the adult nervous system. May mediate homophilic as well as heterophilic cell-cell interaction and contribute to signal transduction through its intracellular domain. Assembled with KCNB1 modulates the gating characteristics of the delayed rectifier voltage-dependent potassium channel KCNB1. .
Accessions	ENST00000369862.1 ENST00000369864.5 Q86WK6

AMIGO1 report