Name | Number of supported studies | Average coverage | |
---|---|---|---|
mast cell | 27 studies | 46% ± 13% | |
macrophage | 22 studies | 34% ± 16% | |
non-classical monocyte | 19 studies | 28% ± 11% | |
classical monocyte | 19 studies | 28% ± 9% | |
monocyte | 15 studies | 34% ± 18% | |
B cell | 15 studies | 27% ± 8% | |
memory B cell | 13 studies | 22% ± 5% | |
conventional dendritic cell | 12 studies | 25% ± 9% | |
naive B cell | 12 studies | 22% ± 6% | |
myeloid cell | 12 studies | 30% ± 8% | |
alveolar macrophage | 8 studies | 60% ± 13% | |
microglial cell | 8 studies | 36% ± 18% | |
dendritic cell | 6 studies | 36% ± 7% | |
neutrophil | 5 studies | 24% ± 7% | |
immature B cell | 4 studies | 36% ± 21% | |
mononuclear phagocyte | 4 studies | 23% ± 2% | |
brush cell | 4 studies | 73% ± 18% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 5390.86 | 21 / 21 | 91% | 62.42 | 459 / 504 |
lung | 100% | 11331.33 | 578 / 578 | 90% | 34.32 | 1044 / 1155 |
pancreas | 90% | 1805.26 | 296 / 328 | 97% | 83.50 | 173 / 178 |
prostate | 95% | 1754.51 | 232 / 245 | 88% | 18.79 | 444 / 502 |
breast | 87% | 1911.63 | 398 / 459 | 88% | 22.67 | 981 / 1118 |
intestine | 83% | 1980.38 | 800 / 966 | 80% | 23.42 | 423 / 527 |
stomach | 75% | 951.57 | 268 / 359 | 80% | 18.95 | 229 / 286 |
esophagus | 86% | 1167.63 | 1240 / 1445 | 65% | 17.03 | 119 / 183 |
kidney | 49% | 952.08 | 44 / 89 | 87% | 43.69 | 788 / 901 |
uterus | 59% | 642.62 | 101 / 170 | 68% | 20.86 | 311 / 459 |
thymus | 43% | 565.69 | 279 / 653 | 78% | 64.76 | 470 / 605 |
brain | 36% | 836.63 | 953 / 2642 | 67% | 15.54 | 474 / 705 |
spleen | 100% | 13890.83 | 241 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 32467.84 | 927 / 929 | 0% | 0 | 0 / 0 |
ovary | 18% | 182.65 | 33 / 180 | 80% | 21.07 | 344 / 430 |
skin | 46% | 455.49 | 829 / 1809 | 52% | 10.38 | 244 / 472 |
adipose | 90% | 1909.47 | 1084 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 50.87 | 26 / 29 |
adrenal gland | 79% | 1080.53 | 203 / 258 | 9% | 1.42 | 21 / 230 |
tonsil | 0% | 0 | 0 / 0 | 71% | 16.54 | 32 / 45 |
blood vessel | 60% | 1070.01 | 798 / 1335 | 0% | 0 | 0 / 0 |
liver | 26% | 275.12 | 59 / 226 | 26% | 9.13 | 104 / 406 |
heart | 37% | 416.80 | 320 / 861 | 0% | 0 | 0 / 0 |
muscle | 3% | 21.83 | 22 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1901753 | Biological process | leukotriene A4 biosynthetic process |
GO_0050796 | Biological process | regulation of insulin secretion |
GO_1904999 | Biological process | positive regulation of leukocyte adhesion to arterial endothelial cell |
GO_0061045 | Biological process | negative regulation of wound healing |
GO_0034440 | Biological process | lipid oxidation |
GO_0002540 | Biological process | leukotriene production involved in inflammatory response |
GO_0019372 | Biological process | lipoxygenase pathway |
GO_0019370 | Biological process | leukotriene biosynthetic process |
GO_0002523 | Biological process | leukocyte migration involved in inflammatory response |
GO_1903671 | Biological process | negative regulation of sprouting angiogenesis |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_1903573 | Biological process | negative regulation of response to endoplasmic reticulum stress |
GO_0036336 | Biological process | dendritic cell migration |
GO_0006959 | Biological process | humoral immune response |
GO_0016525 | Biological process | negative regulation of angiogenesis |
GO_1903426 | Biological process | regulation of reactive oxygen species biosynthetic process |
GO_2001301 | Biological process | lipoxin biosynthetic process |
GO_0006691 | Biological process | leukotriene metabolic process |
GO_0001937 | Biological process | negative regulation of endothelial cell proliferation |
GO_0050728 | Biological process | negative regulation of inflammatory response |
GO_1900015 | Biological process | regulation of cytokine production involved in inflammatory response |
GO_1900407 | Biological process | regulation of cellular response to oxidative stress |
GO_0045598 | Biological process | regulation of fat cell differentiation |
GO_0042759 | Biological process | long-chain fatty acid biosynthetic process |
GO_0002232 | Biological process | leukocyte chemotaxis involved in inflammatory response |
GO_0106014 | Biological process | regulation of inflammatory response to wounding |
GO_0019369 | Biological process | arachidonic acid metabolic process |
GO_0030501 | Biological process | positive regulation of bone mineralization |
GO_0061044 | Biological process | negative regulation of vascular wound healing |
GO_0042593 | Biological process | glucose homeostasis |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0005641 | Cellular component | nuclear envelope lumen |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005635 | Cellular component | nuclear envelope |
GO_0034774 | Cellular component | secretory granule lumen |
GO_0016363 | Cellular component | nuclear matrix |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005829 | Cellular component | cytosol |
GO_0031965 | Cellular component | nuclear membrane |
GO_0004051 | Molecular function | arachidonate 5-lipoxygenase activity |
GO_0016787 | Molecular function | hydrolase activity |
GO_0005506 | Molecular function | iron ion binding |
GO_0036403 | Molecular function | arachidonate 8(S)-lipoxygenase activity |
GO_0004052 | Molecular function | arachidonate 12(S)-lipoxygenase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ALOX5 |
Protein name | Polyunsaturated fatty acid 5-lipoxygenase (EC 1.13.11.-) (Arachidonate 5-lipoxygenase) (5-LO) (5-lipoxygenase) (EC 1.13.11.34) LOX-5 splice variant Polyunsaturated fatty acid 5-lipoxygenase |
Synonyms | LOG5 |
Description | FUNCTION: Catalyzes the oxygenation of arachidonate ((5Z,8Z,11Z,14Z)-eicosatetraenoate) to 5-hydroperoxyeicosatetraenoate (5-HPETE) followed by the dehydration to 5,6- epoxyeicosatetraenoate (Leukotriene A4/LTA4), the first two steps in the biosynthesis of leukotrienes, which are potent mediators of inflammation . Also catalyzes the oxygenation of arachidonate into 8-hydroperoxyicosatetraenoate (8-HPETE) and 12-hydroperoxyicosatetraenoate (12-HPETE) . Displays lipoxin synthase activity being able to convert (15S)-HETE into a conjugate tetraene . Although arachidonate is the preferred substrate, this enzyme can also metabolize oxidized fatty acids derived from arachidonate such as (15S)-HETE, eicosapentaenoate (EPA) such as (18R)- and (18S)-HEPE or docosahexaenoate (DHA) which lead to the formation of specialized pro-resolving mediators (SPM) lipoxin and resolvins E and D respectively, therefore it participates in anti-inflammatory responses . Oxidation of DHA directly inhibits endothelial cell proliferation and sprouting angiogenesis via peroxisome proliferator-activated receptor gamma (PPARgamma) (By similarity). It does not catalyze the oxygenation of linoleic acid and does not convert (5S)-HETE to lipoxin isomers . In addition to inflammatory processes, it participates in dendritic cell migration, wound healing through an antioxidant mechanism based on heme oxygenase-1 (HO-1) regulation expression, monocyte adhesion to the endothelium via ITGAM expression on monocytes (By similarity). Moreover, it helps establish an adaptive humoral immunity by regulating primary resting B cells and follicular helper T cells and participates in the CD40-induced production of reactive oxygen species (ROS) after CD40 ligation in B cells through interaction with PIK3R1 that bridges ALOX5 with CD40 . May also play a role in glucose homeostasis, regulation of insulin secretion and palmitic acid-induced insulin resistance via AMPK (By similarity). Can regulate bone mineralization and fat cell differentiation increases in induced pluripotent stem cells (By similarity). . |
Accessions | I0CLG0 ENST00000622021.4 [P09917-2] ENST00000622238.1 ENST00000542434.5 [P09917-2] ENST00000374391.7 [P09917-1] ENST00000610656.4 [P09917-1] P09917 A0A087X109 |