Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 19 studies | 59% ± 22% | |
endothelial cell | 17 studies | 32% ± 11% | |
glutamatergic neuron | 11 studies | 49% ± 25% | |
microglial cell | 11 studies | 26% ± 10% | |
oligodendrocyte precursor cell | 11 studies | 34% ± 10% | |
oligodendrocyte | 11 studies | 25% ± 11% | |
type II pneumocyte | 9 studies | 37% ± 15% | |
macrophage | 9 studies | 32% ± 10% | |
GABAergic neuron | 8 studies | 46% ± 21% | |
epithelial cell | 7 studies | 38% ± 24% | |
fibroblast | 7 studies | 23% ± 5% | |
type I pneumocyte | 7 studies | 26% ± 8% | |
interneuron | 6 studies | 45% ± 15% | |
adipocyte | 6 studies | 27% ± 3% | |
Mueller cell | 6 studies | 43% ± 10% | |
smooth muscle cell | 6 studies | 20% ± 5% | |
neuron | 5 studies | 46% ± 16% | |
club cell | 5 studies | 26% ± 5% | |
granule cell | 4 studies | 38% ± 14% | |
pericyte | 4 studies | 27% ± 15% | |
retinal pigment epithelial cell | 4 studies | 61% ± 21% | |
cardiac muscle cell | 4 studies | 19% ± 3% | |
dendritic cell | 4 studies | 21% ± 4% | |
retinal cone cell | 4 studies | 27% ± 13% | |
retinal ganglion cell | 4 studies | 39% ± 17% | |
ciliated cell | 4 studies | 22% ± 4% | |
monocyte | 4 studies | 28% ± 6% | |
GABAergic interneuron | 3 studies | 33% ± 10% | |
glial cell | 3 studies | 33% ± 9% | |
GABAergic amacrine cell | 3 studies | 20% ± 4% | |
hepatocyte | 3 studies | 33% ± 13% | |
ependymal cell | 3 studies | 51% ± 7% | |
myeloid cell | 3 studies | 26% ± 8% | |
respiratory goblet cell | 3 studies | 30% ± 3% | |
T cell | 3 studies | 27% ± 9% | |
alveolar macrophage | 3 studies | 26% ± 6% | |
lymphocyte | 3 studies | 24% ± 5% | |
basal cell | 3 studies | 38% ± 18% | |
endothelial cell of lymphatic vessel | 3 studies | 18% ± 2% | |
mesothelial cell | 3 studies | 29% ± 3% | |
mucus secreting cell | 3 studies | 26% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4639.19 | 2641 / 2642 | 100% | 69.81 | 702 / 705 |
stomach | 100% | 3559.05 | 358 / 359 | 96% | 40.64 | 275 / 286 |
intestine | 100% | 7194.32 | 966 / 966 | 95% | 38.86 | 503 / 527 |
esophagus | 100% | 1777.30 | 1439 / 1445 | 95% | 29.86 | 174 / 183 |
skin | 97% | 2757.00 | 1762 / 1809 | 97% | 51.25 | 458 / 472 |
lung | 99% | 4612.24 | 574 / 578 | 94% | 48.37 | 1088 / 1155 |
thymus | 100% | 7063.23 | 653 / 653 | 93% | 33.59 | 560 / 605 |
prostate | 100% | 2134.24 | 245 / 245 | 91% | 15.64 | 457 / 502 |
pancreas | 99% | 1514.67 | 324 / 328 | 92% | 31.84 | 164 / 178 |
breast | 100% | 1701.36 | 458 / 459 | 90% | 18.16 | 1008 / 1118 |
kidney | 100% | 3404.63 | 89 / 89 | 88% | 22.29 | 794 / 901 |
adrenal gland | 100% | 2157.67 | 258 / 258 | 84% | 17.18 | 194 / 230 |
bladder | 100% | 1502.76 | 21 / 21 | 68% | 18.55 | 341 / 504 |
uterus | 100% | 2050.35 | 170 / 170 | 63% | 8.92 | 291 / 459 |
ovary | 100% | 1938.76 | 180 / 180 | 62% | 7.27 | 265 / 430 |
muscle | 100% | 3962.97 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1303.57 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 1545.64 | 1192 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 1472.06 | 1312 / 1335 | 0% | 0 | 0 / 0 |
liver | 69% | 619.52 | 157 / 226 | 27% | 2.95 | 109 / 406 |
eye | 0% | 0 | 0 / 0 | 96% | 103.39 | 77 / 80 |
heart | 62% | 562.17 | 532 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 60% | 9.23 | 27 / 45 |
lymph node | 0% | 0 | 0 / 0 | 48% | 5.34 | 14 / 29 |
peripheral blood | 29% | 332.93 | 268 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006730 | Biological process | one-carbon metabolic process |
GO_0033353 | Biological process | S-adenosylmethionine cycle |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0043005 | Cellular component | neuron projection |
GO_0005515 | Molecular function | protein binding |
GO_0004013 | Molecular function | adenosylhomocysteinase activity |
Gene name | AHCYL2 |
Protein name | Adenosylhomocysteinase like 2 Adenosylhomocysteinase 3 (AdoHcyase 3) (EC 3.13.2.1) (IP(3)Rs binding protein released with IP(3) 2) (IRBIT2) (Long-IRBIT) (S-adenosyl-L-homocysteine hydrolase 3) (S-adenosylhomocysteine hydrolase-like protein 2) |
Synonyms | KIAA0828 |
Description | FUNCTION: May regulate the electrogenic sodium/bicarbonate cotransporter SLC4A4 activity and Mg(2+)-sensitivity. On the contrary of its homolog AHCYL1, does not regulate ITPR1 sensitivity to inositol 1,4,5-trisphosphate . . |
Accessions | ENST00000490911.5 [Q96HN2-3] ENST00000466993.5 ENST00000460109.5 H0Y8B3 ENST00000466924.1 ENST00000325006.8 [Q96HN2-1] C9K0S0 Q96HN2 ENST00000474594.5 [Q96HN2-4] ENST00000446544.6 [Q96HN2-2] C9JZV7 |