Insufficient scRNA-seq data for expression of ZSCAN4 at single-cell level.
Insufficient scRNA-seq data for expression of ZSCAN4 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 97% | 35.64 | 635 / 653 | 29% | 1.38 | 173 / 605 |
bladder | 95% | 79.00 | 20 / 21 | 29% | 1.28 | 146 / 504 |
lung | 74% | 18.49 | 429 / 578 | 13% | 0.39 | 150 / 1155 |
prostate | 83% | 64.56 | 203 / 245 | 3% | 0.06 | 14 / 502 |
stomach | 73% | 24.09 | 261 / 359 | 9% | 0.17 | 26 / 286 |
spleen | 80% | 25.83 | 193 / 241 | 0% | 0 | 0 / 0 |
adipose | 79% | 20.17 | 955 / 1204 | 0% | 0 | 0 / 0 |
kidney | 74% | 10.35 | 66 / 89 | 4% | 0.08 | 34 / 901 |
heart | 76% | 15.57 | 658 / 861 | 0% | 0 | 0 / 0 |
esophagus | 62% | 10.50 | 894 / 1445 | 13% | 0.39 | 23 / 183 |
skin | 72% | 45.71 | 1298 / 1809 | 2% | 0.17 | 10 / 472 |
intestine | 66% | 11.49 | 640 / 966 | 5% | 0.16 | 27 / 527 |
breast | 65% | 12.63 | 297 / 459 | 1% | 0.12 | 14 / 1118 |
uterus | 49% | 10.26 | 84 / 170 | 10% | 0.37 | 47 / 459 |
pancreas | 23% | 2.86 | 74 / 328 | 20% | 0.44 | 35 / 178 |
blood vessel | 40% | 6.59 | 529 / 1335 | 0% | 0 | 0 / 0 |
ovary | 39% | 5.47 | 70 / 180 | 0% | 0.01 | 2 / 430 |
muscle | 35% | 3.79 | 281 / 803 | 0% | 0 | 0 / 0 |
brain | 32% | 7.55 | 857 / 2642 | 0% | 0 | 0 / 705 |
adrenal gland | 25% | 2.52 | 65 / 258 | 0% | 0.01 | 1 / 230 |
peripheral blood | 21% | 3.11 | 195 / 929 | 0% | 0 | 0 / 0 |
liver | 15% | 1.41 | 35 / 226 | 1% | 0.03 | 6 / 406 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.07 | 1 / 29 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.02 | 1 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045950 | Biological process | negative regulation of mitotic recombination |
GO_0010833 | Biological process | telomere maintenance via telomere lengthening |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000781 | Cellular component | chromosome, telomeric region |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZSCAN4 |
Protein name | Zinc finger and SCAN domain-containing protein 4 (Zinc finger protein 494) |
Synonyms | ZNF494 |
Description | FUNCTION: Embryonic stem (ES) cell-specific transcription factor required to regulate ES cell pluripotency. Binds telomeres and plays a key role in genomic stability in ES cells by regulating telomere elongation. Acts as an activator of spontaneous telomere sister chromatid exchange (T-SCE) and telomere elongation in undifferentiated ES cells (By similarity). . |
Accessions | Q8NAM6 ENST00000318203.9 |