Insufficient scRNA-seq data for expression of ZSCAN21 at single-cell level.
Insufficient scRNA-seq data for expression of ZSCAN21 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 378.98 | 245 / 245 | 99% | 8.10 | 499 / 502 |
brain | 100% | 236.96 | 2635 / 2642 | 100% | 12.33 | 702 / 705 |
breast | 100% | 310.93 | 459 / 459 | 99% | 8.81 | 1108 / 1118 |
skin | 100% | 271.92 | 1807 / 1809 | 99% | 12.15 | 466 / 472 |
ovary | 100% | 341.06 | 180 / 180 | 98% | 6.61 | 421 / 430 |
lung | 99% | 207.04 | 574 / 578 | 98% | 6.49 | 1134 / 1155 |
pancreas | 100% | 197.16 | 328 / 328 | 97% | 6.26 | 173 / 178 |
intestine | 100% | 317.01 | 966 / 966 | 97% | 5.74 | 512 / 527 |
kidney | 100% | 280.20 | 89 / 89 | 97% | 6.49 | 872 / 901 |
thymus | 100% | 319.21 | 653 / 653 | 97% | 5.99 | 584 / 605 |
stomach | 100% | 254.35 | 359 / 359 | 96% | 5.88 | 274 / 286 |
bladder | 100% | 331.71 | 21 / 21 | 96% | 5.58 | 482 / 504 |
esophagus | 100% | 274.86 | 1445 / 1445 | 96% | 5.94 | 175 / 183 |
uterus | 100% | 375.69 | 170 / 170 | 93% | 5.87 | 428 / 459 |
adrenal gland | 100% | 255.90 | 258 / 258 | 91% | 5.21 | 210 / 230 |
liver | 100% | 199.86 | 225 / 226 | 89% | 5.52 | 361 / 406 |
adipose | 100% | 286.62 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 272.46 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 235.06 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.60 | 1 / 1 |
muscle | 100% | 295.16 | 802 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 4.96 | 44 / 45 |
heart | 98% | 155.26 | 840 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 9.23 | 78 / 80 |
lymph node | 0% | 0 | 0 / 0 | 76% | 3.97 | 22 / 29 |
peripheral blood | 68% | 94.78 | 631 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007283 | Biological process | spermatogenesis |
GO_0007141 | Biological process | male meiosis I |
GO_0030154 | Biological process | cell differentiation |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZSCAN21 |
Protein name | Zinc finger and SCAN domain containing 21 (Zinc finger protein 38, isoform CRA_b) Zinc finger and SCAN domain containing 21 Zinc finger and SCAN domain-containing protein 21 (Renal carcinoma antigen NY-REN-21) (Zinc finger protein 38 homolog) (Zfp-38) ZSCAN21 protein |
Synonyms | hCG_1641359 ZNF38 ZFP38 |
Description | FUNCTION: Strong transcriptional activator (By similarity). Plays an important role in spermatogenesis; essential for the progression of meiotic prophase I in spermatocytes (By similarity). . |
Accessions | ENST00000438937.1 C9JHD9 ENST00000456748.6 Q9Y5A6 G3V0F4 ENST00000292450.9 Q8N506 |