Name | Number of supported studies | Average coverage | |
---|---|---|---|
interneuron | 5 studies | 27% ± 13% | |
GABAergic neuron | 5 studies | 27% ± 5% | |
glutamatergic neuron | 5 studies | 30% ± 11% | |
neuron | 4 studies | 25% ± 11% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 25% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1528.22 | 2639 / 2642 | 99% | 43.02 | 700 / 705 |
adrenal gland | 100% | 2989.29 | 258 / 258 | 85% | 15.71 | 196 / 230 |
thymus | 99% | 1134.37 | 647 / 653 | 85% | 7.76 | 512 / 605 |
intestine | 93% | 648.14 | 899 / 966 | 84% | 6.84 | 444 / 527 |
pancreas | 99% | 581.77 | 325 / 328 | 75% | 4.55 | 134 / 178 |
stomach | 85% | 327.86 | 304 / 359 | 81% | 7.13 | 231 / 286 |
uterus | 99% | 847.09 | 168 / 170 | 66% | 8.92 | 304 / 459 |
kidney | 97% | 599.04 | 86 / 89 | 66% | 7.54 | 598 / 901 |
ovary | 100% | 1225.16 | 180 / 180 | 53% | 4.11 | 227 / 430 |
breast | 75% | 640.12 | 344 / 459 | 62% | 6.24 | 689 / 1118 |
esophagus | 55% | 231.00 | 788 / 1445 | 80% | 8.50 | 147 / 183 |
bladder | 57% | 583.43 | 12 / 21 | 69% | 6.31 | 346 / 504 |
prostate | 96% | 619.77 | 234 / 245 | 23% | 1.09 | 113 / 502 |
lung | 56% | 199.76 | 324 / 578 | 58% | 5.20 | 666 / 1155 |
spleen | 100% | 819.19 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.70 | 1 / 1 |
skin | 82% | 1394.31 | 1475 / 1809 | 17% | 1.70 | 78 / 472 |
blood vessel | 94% | 610.70 | 1253 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 58% | 5.38 | 26 / 45 |
heart | 53% | 261.98 | 457 / 861 | 0% | 0 | 0 / 0 |
adipose | 43% | 144.28 | 512 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 31% | 1.91 | 9 / 29 |
liver | 1% | 2.77 | 2 / 226 | 19% | 1.27 | 79 / 406 |
peripheral blood | 15% | 97.38 | 143 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 11% | 0.54 | 9 / 80 |
muscle | 6% | 21.87 | 52 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010468 | Biological process | regulation of gene expression |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF711 |
Protein name | ZNF711 protein Zinc finger protein 711 (Zinc finger protein 6) |
Synonyms | CMPX1 ZNF6 |
Description | FUNCTION: Transcription regulator required for brain development . Probably acts as a transcription factor that binds to the promoter of target genes and recruits PHF8 histone demethylase, leading to activated expression of genes involved in neuron development, such as KDM5C . May compete with transcription factor ARX for activation of expression of KDM5C . . |
Accessions | ENST00000373165.7 [Q9Y462-1] ENST00000276123.7 [Q9Y462-1] ENST00000360700.4 [Q9Y462-3] Q6PK66 Q9Y462 ENST00000674551.1 [Q9Y462-3] |