Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| endothelial cell | 5 studies | 20% ± 6% | |
| astrocyte | 4 studies | 29% ± 9% | |
| glutamatergic neuron | 4 studies | 42% ± 13% | |
| oligodendrocyte precursor cell | 4 studies | 25% ± 8% | |
| oligodendrocyte | 4 studies | 22% ± 4% | |
| GABAergic neuron | 3 studies | 41% ± 8% | |
| interneuron | 3 studies | 39% ± 19% | |
| neuron | 3 studies | 23% ± 5% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 35% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 546.58 | 245 / 245 | 100% | 4.24 | 501 / 502 |
| brain | 100% | 596.13 | 2642 / 2642 | 100% | 5.36 | 703 / 705 |
| thymus | 100% | 604.33 | 653 / 653 | 98% | 3.89 | 595 / 605 |
| breast | 100% | 542.52 | 459 / 459 | 98% | 4.61 | 1093 / 1118 |
| adrenal gland | 100% | 576.51 | 258 / 258 | 97% | 4.09 | 223 / 230 |
| ovary | 100% | 711.10 | 180 / 180 | 97% | 3.65 | 416 / 430 |
| kidney | 100% | 399.90 | 89 / 89 | 90% | 2.86 | 810 / 901 |
| pancreas | 100% | 241.29 | 327 / 328 | 88% | 2.29 | 156 / 178 |
| skin | 100% | 430.48 | 1808 / 1809 | 87% | 2.76 | 409 / 472 |
| lung | 100% | 392.22 | 577 / 578 | 76% | 2.11 | 881 / 1155 |
| bladder | 100% | 513.86 | 21 / 21 | 69% | 1.94 | 349 / 504 |
| uterus | 100% | 687.95 | 170 / 170 | 54% | 2.17 | 249 / 459 |
| liver | 87% | 134.64 | 196 / 226 | 52% | 1.30 | 212 / 406 |
| stomach | 100% | 326.99 | 359 / 359 | 32% | 0.67 | 92 / 286 |
| esophagus | 100% | 418.51 | 1443 / 1445 | 32% | 0.82 | 59 / 183 |
| intestine | 99% | 436.29 | 960 / 966 | 19% | 0.38 | 99 / 527 |
| adipose | 100% | 482.60 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 577.38 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 392.36 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 1.35 | 1 / 1 |
| muscle | 98% | 278.68 | 790 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 289.83 | 846 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 68% | 1.46 | 54 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 62% | 1.10 | 18 / 29 |
| tonsil | 0% | 0 | 0 / 0 | 42% | 0.75 | 19 / 45 |
| peripheral blood | 39% | 91.89 | 361 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0060669 | Biological process | embryonic placenta morphogenesis |
| GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
| GO_0001701 | Biological process | in utero embryonic development |
| GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| GO_0000976 | Molecular function | transcription cis-regulatory region binding |
| Gene name | ZNF568 |
| Protein name | ZNF568 protein Zinc finger protein 568 |
| Synonyms | |
| Description | FUNCTION: Has transcriptional repression activity, partially through the recruitment of the corepressor TRIM28 but has also repression activity independently of this interaction. Essential during embryonic development, where it acts as a direct repressor of a placental-specific transcript of IGF2 in early development and regulates convergent extension movements required for axis elongation and tissue morphogenesis in all germ layers. Also important for normal morphogenesis of extraembryonic tissues including the yolk sac, extraembryonic mesoderm and placenta. May enhance proliferation or maintenance of neural stem cells. . FUNCTION: May be involved in transcriptional regulation. . |
| Accessions | A0A994J5R8 ENST00000433993.6 A0A994J7Z8 C9K0F2 ENST00000706169.1 A0A994J5D8 A2VDJ6 ENST00000706165.1 C9JLX5 ENST00000706166.1 ENST00000586353.6 A0A994J5R3 ENST00000706168.1 ENST00000587857.6 A0A994J7M0 ENST00000706170.1 [Q3ZCX4-1] ENST00000706173.1 ENST00000706167.1 ENST00000706172.1 C9JXQ5 ENST00000706171.1 Q96AZ9 K7ELK8 ENST00000592567.1 Q3ZCX4 A0A0C4DGP9 ENST00000333987.12 [Q3ZCX4-1] K7EL97 A0A994J7L7 ENST00000444991.6 ENST00000427117.6 ENST00000587857.6 [Q3ZCX4-2] ENST00000588596.1 K7EKY2 ENST00000587130.6 [Q3ZCX4-2] C9JZ58 ENST00000455817.5 ENST00000455427.7 [Q3ZCX4-3] ENST00000587130.6 A0A1Y8EHF7 ENST00000415168.5 [Q3ZCX4-2] |
