Name | Number of supported studies | Average coverage | |
---|---|---|---|
interneuron | 5 studies | 32% ± 18% | |
GABAergic neuron | 5 studies | 31% ± 11% | |
astrocyte | 5 studies | 31% ± 11% | |
endothelial cell | 4 studies | 27% ± 12% | |
oligodendrocyte precursor cell | 4 studies | 27% ± 9% | |
glutamatergic neuron | 4 studies | 39% ± 8% | |
oligodendrocyte | 4 studies | 24% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 29% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 730.33 | 245 / 245 | 100% | 4.08 | 500 / 502 |
ovary | 100% | 806.51 | 180 / 180 | 99% | 4.66 | 427 / 430 |
thymus | 100% | 819.52 | 653 / 653 | 99% | 3.62 | 596 / 605 |
breast | 100% | 626.66 | 459 / 459 | 98% | 3.75 | 1095 / 1118 |
brain | 97% | 243.70 | 2551 / 2642 | 99% | 3.78 | 701 / 705 |
kidney | 100% | 438.80 | 89 / 89 | 94% | 3.28 | 846 / 901 |
adrenal gland | 100% | 458.93 | 257 / 258 | 92% | 2.17 | 212 / 230 |
lung | 100% | 549.32 | 578 / 578 | 90% | 3.12 | 1038 / 1155 |
pancreas | 98% | 248.53 | 321 / 328 | 92% | 2.75 | 163 / 178 |
bladder | 100% | 596.67 | 21 / 21 | 88% | 3.06 | 446 / 504 |
skin | 100% | 529.39 | 1800 / 1809 | 86% | 3.05 | 404 / 472 |
uterus | 100% | 744.44 | 170 / 170 | 85% | 3.06 | 389 / 459 |
stomach | 99% | 462.33 | 357 / 359 | 73% | 1.96 | 210 / 286 |
intestine | 100% | 643.47 | 966 / 966 | 70% | 1.74 | 370 / 527 |
esophagus | 100% | 569.35 | 1445 / 1445 | 52% | 1.49 | 96 / 183 |
liver | 89% | 234.75 | 202 / 226 | 55% | 1.09 | 224 / 406 |
blood vessel | 100% | 655.24 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 712.89 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.71 | 1 / 1 |
adipose | 100% | 525.12 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 96% | 260.96 | 823 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 83% | 2.13 | 24 / 29 |
muscle | 82% | 150.79 | 659 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 2.36 | 64 / 80 |
tonsil | 0% | 0 | 0 / 0 | 80% | 2.07 | 36 / 45 |
peripheral blood | 47% | 131.12 | 432 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006366 | Biological process | transcription by RNA polymerase II |
GO_0006359 | Biological process | regulation of transcription by RNA polymerase III |
GO_0006383 | Biological process | transcription by RNA polymerase III |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF345 |
Protein name | Zinc finger protein 345 (Zinc finger protein HZF10) Zinc finger protein 345 |
Synonyms | |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000532141.6 K7EKZ8 ENST00000586646.1 ENST00000589046.1 E9PLT7 K7EQ01 ENST00000526123.5 ENST00000586933.5 Q14585 ENST00000529555.1 ENST00000420450.6 K7EM63 K7ESK8 F8W8R5 ENST00000331800.9 ENST00000585396.1 |