Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 15 studies | 22% ± 6% | |
endothelial cell | 11 studies | 24% ± 7% | |
astrocyte | 9 studies | 29% ± 9% | |
oligodendrocyte | 7 studies | 29% ± 11% | |
myofibroblast cell | 6 studies | 16% ± 1% | |
pericyte | 6 studies | 20% ± 4% | |
retinal rod cell | 6 studies | 25% ± 7% | |
adipocyte | 6 studies | 29% ± 10% | |
smooth muscle cell | 5 studies | 18% ± 2% | |
retina horizontal cell | 5 studies | 25% ± 6% | |
retinal cone cell | 5 studies | 29% ± 12% | |
cardiac muscle cell | 5 studies | 23% ± 4% | |
Mueller cell | 5 studies | 27% ± 7% | |
GABAergic neuron | 5 studies | 38% ± 13% | |
oligodendrocyte precursor cell | 5 studies | 33% ± 11% | |
neuron | 4 studies | 34% ± 10% | |
B cell | 4 studies | 18% ± 3% | |
epithelial cell | 4 studies | 39% ± 6% | |
amacrine cell | 4 studies | 32% ± 8% | |
ciliated cell | 4 studies | 19% ± 4% | |
glutamatergic neuron | 4 studies | 50% ± 17% | |
type I pneumocyte | 4 studies | 19% ± 4% | |
macrophage | 4 studies | 17% ± 1% | |
interneuron | 4 studies | 35% ± 17% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 17% ± 2% | |
connective tissue cell | 3 studies | 25% ± 3% | |
retinal bipolar neuron | 3 studies | 27% ± 9% | |
rod bipolar cell | 3 studies | 24% ± 3% | |
microglial cell | 3 studies | 17% ± 1% | |
club cell | 3 studies | 21% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 3089.08 | 2642 / 2642 | 100% | 40.84 | 705 / 705 |
prostate | 100% | 3029.48 | 245 / 245 | 100% | 21.84 | 502 / 502 |
breast | 100% | 2327.35 | 459 / 459 | 100% | 27.66 | 1115 / 1118 |
thymus | 100% | 3476.71 | 653 / 653 | 99% | 22.64 | 601 / 605 |
ovary | 100% | 3440.75 | 180 / 180 | 99% | 18.87 | 427 / 430 |
adrenal gland | 100% | 2477.16 | 258 / 258 | 99% | 21.58 | 228 / 230 |
pancreas | 100% | 2016.16 | 328 / 328 | 98% | 15.90 | 175 / 178 |
lung | 100% | 2156.29 | 578 / 578 | 98% | 15.07 | 1133 / 1155 |
esophagus | 99% | 2235.67 | 1431 / 1445 | 98% | 15.13 | 180 / 183 |
kidney | 100% | 1943.09 | 89 / 89 | 97% | 18.81 | 877 / 901 |
uterus | 100% | 3192.35 | 170 / 170 | 96% | 17.77 | 442 / 459 |
bladder | 100% | 2805.62 | 21 / 21 | 94% | 12.43 | 476 / 504 |
liver | 99% | 1398.08 | 224 / 226 | 93% | 11.43 | 378 / 406 |
stomach | 100% | 1831.98 | 358 / 359 | 92% | 10.93 | 262 / 286 |
intestine | 100% | 2752.16 | 965 / 966 | 91% | 10.40 | 477 / 527 |
skin | 99% | 1540.90 | 1794 / 1809 | 85% | 13.94 | 402 / 472 |
muscle | 100% | 2718.23 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2834.27 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.12 | 1 / 1 |
blood vessel | 100% | 2131.74 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1938.47 | 1201 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 2102.48 | 852 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 10.79 | 41 / 45 |
lymph node | 0% | 0 | 0 / 0 | 79% | 8.47 | 23 / 29 |
eye | 0% | 0 | 0 / 0 | 69% | 8.08 | 55 / 80 |
peripheral blood | 25% | 447.18 | 230 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZNF302 |
Protein name | Zinc finger protein 302 Zinc finger protein 302 (Zinc finger protein 135-like) (Zinc finger protein 140-like) (Zinc finger protein 327) |
Synonyms | ZNF140L ZNF327 ZNF135L |
Description | FUNCTION: May be involved in transcriptional regulation. |
Accessions | ENST00000505163.5 ENST00000613363.4 ENST00000457781.6 [Q9NR11-2] D6R9Q0 D6RA23 V9GYY2 B4DMN2 ENST00000446502.6 ENST00000506901.5 E7EVR1 ENST00000505365.2 Q9NR11 D6RAM0 ENST00000509528.5 A0A087WYF4 ENST00000423823.6 [Q9NR11-2] ENST00000507959.5 ENST00000505242.6 [Q9NR11-2] ENST00000502743.5 |