Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| GABAergic neuron | 5 studies | 29% ± 10% | |
| glutamatergic neuron | 4 studies | 34% ± 12% | |
| astrocyte | 4 studies | 19% ± 4% | |
| interneuron | 4 studies | 29% ± 19% | |
| oligodendrocyte | 4 studies | 23% ± 5% | |
| retinal rod cell | 3 studies | 20% ± 6% | |
| oligodendrocyte precursor cell | 3 studies | 26% ± 7% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 29% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 100% | 515.50 | 245 / 245 | 100% | 14.24 | 502 / 502 |
| brain | 100% | 440.39 | 2639 / 2642 | 100% | 15.75 | 705 / 705 |
| breast | 100% | 443.82 | 459 / 459 | 100% | 15.38 | 1114 / 1118 |
| ovary | 100% | 631.42 | 180 / 180 | 100% | 12.44 | 428 / 430 |
| thymus | 100% | 694.12 | 653 / 653 | 100% | 13.94 | 602 / 605 |
| adrenal gland | 100% | 474.86 | 258 / 258 | 97% | 8.16 | 224 / 230 |
| kidney | 100% | 401.66 | 89 / 89 | 97% | 8.64 | 870 / 901 |
| stomach | 100% | 339.92 | 358 / 359 | 97% | 8.50 | 276 / 286 |
| pancreas | 100% | 306.64 | 327 / 328 | 95% | 5.87 | 169 / 178 |
| bladder | 100% | 405.52 | 21 / 21 | 94% | 8.21 | 475 / 504 |
| intestine | 100% | 397.60 | 964 / 966 | 94% | 7.69 | 493 / 527 |
| lung | 98% | 327.53 | 564 / 578 | 93% | 7.47 | 1079 / 1155 |
| esophagus | 99% | 297.64 | 1427 / 1445 | 86% | 6.51 | 158 / 183 |
| skin | 99% | 253.56 | 1788 / 1809 | 79% | 4.60 | 375 / 472 |
| liver | 100% | 236.93 | 225 / 226 | 77% | 4.32 | 311 / 406 |
| uterus | 100% | 434.94 | 170 / 170 | 71% | 5.30 | 325 / 459 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 7.84 | 29 / 29 |
| spleen | 100% | 513.77 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 3.18 | 1 / 1 |
| adipose | 100% | 337.90 | 1199 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 261.84 | 1326 / 1335 | 0% | 0 | 0 / 0 |
| muscle | 99% | 307.39 | 797 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 272.52 | 844 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 61% | 208.72 | 571 / 929 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 61% | 2.53 | 49 / 80 |
| tonsil | 0% | 0 | 0 / 0 | 60% | 2.77 | 27 / 45 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
| GO_0006355 | Biological process | regulation of DNA-templated transcription |
| GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
| GO_0005634 | Cellular component | nucleus |
| GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO_0046872 | Molecular function | metal ion binding |
| Gene name | ZNF253 |
| Protein name | Zinc finger protein 253 (Bone marrow zinc finger 1) (BMZF-1) (Zinc finger protein 411) Zinc finger protein 253 |
| Synonyms | ZNF411 BMZF1 |
| Description | FUNCTION: May function as a transcription factor. Seem to have a transcriptional repression activity. |
| Accessions | K7EP55 ENST00000355650.4 [O75346-2] ENST00000592725.1 O75346 ENST00000589717.2 [O75346-1] |
