Insufficient scRNA-seq data for expression of ZFP42 at single-cell level.
Insufficient scRNA-seq data for expression of ZFP42 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 44% | 5.35 | 252 / 578 | 14% | 2.39 | 159 / 1155 |
kidney | 51% | 4.04 | 45 / 89 | 1% | 0.02 | 10 / 901 |
ovary | 3% | 0.24 | 6 / 180 | 35% | 2.91 | 150 / 430 |
skin | 21% | 1.73 | 387 / 1809 | 6% | 0.63 | 26 / 472 |
adipose | 22% | 3.70 | 266 / 1204 | 0% | 0 | 0 / 0 |
stomach | 9% | 1.15 | 34 / 359 | 5% | 0.61 | 15 / 286 |
esophagus | 3% | 0.19 | 47 / 1445 | 11% | 1.17 | 20 / 183 |
uterus | 2% | 0.41 | 4 / 170 | 10% | 1.08 | 45 / 459 |
breast | 8% | 0.52 | 35 / 459 | 4% | 1.47 | 44 / 1118 |
bladder | 5% | 0.24 | 1 / 21 | 7% | 1.56 | 34 / 504 |
prostate | 7% | 0.53 | 18 / 245 | 0% | 0 | 0 / 502 |
thymus | 5% | 0.28 | 32 / 653 | 1% | 0.08 | 6 / 605 |
intestine | 4% | 0.22 | 35 / 966 | 2% | 0.14 | 10 / 527 |
pancreas | 1% | 0.09 | 4 / 328 | 3% | 0.24 | 5 / 178 |
adrenal gland | 2% | 0.12 | 6 / 258 | 1% | 0.04 | 2 / 230 |
heart | 2% | 0.22 | 21 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
brain | 2% | 0.11 | 48 / 2642 | 0% | 0.01 | 2 / 705 |
peripheral blood | 2% | 0.09 | 16 / 929 | 0% | 0 | 0 / 0 |
liver | 0% | 0.02 | 1 / 226 | 1% | 0.07 | 5 / 406 |
blood vessel | 1% | 0.11 | 18 / 1335 | 0% | 0 | 0 / 0 |
spleen | 1% | 0.07 | 3 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.04 | 3 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0008584 | Biological process | male gonad development |
GO_0051321 | Biological process | meiotic cell cycle |
GO_0008585 | Biological process | female gonad development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0031519 | Cellular component | PcG protein complex |
GO_0005737 | Cellular component | cytoplasm |
GO_0000785 | Cellular component | chromatin |
GO_0005667 | Cellular component | transcription regulator complex |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZFP42 |
Protein name | Zinc finger protein 42 homolog (Zfp-42) (Reduced expression protein 1) (REX-1) (hREX-1) (Zinc finger protein 754) |
Synonyms | ZNF754 REX1 |
Description | FUNCTION: Involved in the reprogramming of X-chromosome inactivation during the acquisition of pluripotency. Required for efficient elongation of TSIX, a non-coding RNA antisense to XIST. Binds DXPas34 enhancer within the TSIX promoter. Involved in ES cell self-renewal (By similarity). . |
Accessions | ENST00000618147.1 ENST00000509524.5 Q96MM3 ENST00000326866.5 |