Name | Number of supported studies | Average coverage | |
---|---|---|---|
plasmacytoid dendritic cell | 18 studies | 43% ± 11% | |
plasma cell | 3 studies | 23% ± 1% | |
GABAergic neuron | 3 studies | 34% ± 5% | |
glutamatergic neuron | 3 studies | 44% ± 3% | |
astrocyte | 3 studies | 31% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 31% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 858.98 | 1445 / 1445 | 100% | 4.75 | 183 / 183 |
breast | 100% | 703.35 | 459 / 459 | 100% | 6.02 | 1117 / 1118 |
lung | 100% | 581.04 | 578 / 578 | 100% | 5.45 | 1153 / 1155 |
prostate | 100% | 749.48 | 245 / 245 | 100% | 5.01 | 501 / 502 |
uterus | 100% | 652.56 | 170 / 170 | 100% | 5.02 | 458 / 459 |
intestine | 100% | 962.90 | 966 / 966 | 100% | 3.33 | 525 / 527 |
skin | 100% | 575.05 | 1808 / 1809 | 100% | 6.71 | 470 / 472 |
ovary | 99% | 451.25 | 179 / 180 | 100% | 7.12 | 430 / 430 |
stomach | 99% | 477.24 | 357 / 359 | 100% | 3.60 | 286 / 286 |
thymus | 100% | 549.64 | 652 / 653 | 100% | 5.46 | 602 / 605 |
bladder | 100% | 833.90 | 21 / 21 | 99% | 4.04 | 499 / 504 |
kidney | 100% | 972.99 | 89 / 89 | 99% | 6.23 | 890 / 901 |
brain | 96% | 340.42 | 2533 / 2642 | 99% | 4.11 | 701 / 705 |
pancreas | 93% | 231.92 | 306 / 328 | 98% | 3.56 | 174 / 178 |
adrenal gland | 99% | 424.59 | 255 / 258 | 91% | 2.44 | 210 / 230 |
liver | 93% | 276.73 | 211 / 226 | 92% | 2.67 | 374 / 406 |
adipose | 100% | 658.96 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 6.61 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 18.58 | 29 / 29 |
muscle | 100% | 1055.76 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 858.68 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.83 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.33 | 1 / 1 |
blood vessel | 100% | 623.72 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1744.86 | 910 / 929 | 0% | 0 | 0 / 0 |
heart | 94% | 411.80 | 810 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002244 | Biological process | hematopoietic progenitor cell differentiation |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | ZFAT |
Protein name | Zinc finger and AT-hook domain containing ZFAT protein Zinc finger protein ZFAT (Zinc finger gene in AITD susceptibility region) (Zinc finger protein 406) |
Synonyms | KIAA1485 ZFAT1 ZNF406 |
Description | FUNCTION: May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated (By similarity). . |
Accessions | ENST00000377838.8 [Q9P243-1] ENST00000520356.5 E5RJL9 ENST00000523924.5 E9PBN4 H0YBJ1 E5RH37 ENST00000520727.5 [Q9P243-2] Q4KMQ4 Q6PJQ2 ENST00000523399.5 [Q9P243-4] ENST00000518191.1 ENST00000520214.5 [Q9P243-2] ENST00000519827.1 E5RJT2 F8W7M8 ENST00000522257.5 Q9P243 ENST00000429442.6 ENST00000521673.5 H0YC51 ENST00000523243.5 E5RGN2 |