Insufficient scRNA-seq data for expression of XRCC3 at single-cell level.
Insufficient scRNA-seq data for expression of XRCC3 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1362.20 | 1445 / 1445 | 100% | 10.23 | 183 / 183 |
uterus | 100% | 1869.00 | 170 / 170 | 100% | 12.06 | 457 / 459 |
bladder | 100% | 1324.19 | 21 / 21 | 99% | 8.69 | 497 / 504 |
ovary | 100% | 1736.00 | 180 / 180 | 99% | 8.41 | 424 / 430 |
intestine | 100% | 1422.83 | 966 / 966 | 98% | 8.08 | 515 / 527 |
brain | 98% | 724.85 | 2587 / 2642 | 99% | 6.46 | 701 / 705 |
stomach | 100% | 938.46 | 359 / 359 | 97% | 6.93 | 278 / 286 |
lung | 100% | 1766.32 | 578 / 578 | 97% | 7.52 | 1120 / 1155 |
skin | 100% | 1440.73 | 1809 / 1809 | 96% | 6.58 | 455 / 472 |
breast | 100% | 1292.64 | 459 / 459 | 94% | 5.33 | 1055 / 1118 |
prostate | 100% | 1859.21 | 245 / 245 | 94% | 4.07 | 471 / 502 |
thymus | 100% | 1599.55 | 653 / 653 | 92% | 4.96 | 557 / 605 |
pancreas | 98% | 559.85 | 322 / 328 | 94% | 6.40 | 167 / 178 |
adrenal gland | 100% | 760.22 | 257 / 258 | 65% | 2.40 | 150 / 230 |
kidney | 100% | 1063.47 | 89 / 89 | 63% | 2.69 | 564 / 901 |
liver | 98% | 545.27 | 221 / 226 | 62% | 2.65 | 250 / 406 |
adipose | 100% | 1228.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.68 | 29 / 29 |
spleen | 100% | 2695.06 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 10.61 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.25 | 1 / 1 |
blood vessel | 100% | 1349.43 | 1332 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 700.38 | 846 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 1166.57 | 907 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 5.09 | 76 / 80 |
muscle | 87% | 357.74 | 696 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090656 | Biological process | t-circle formation |
GO_0006281 | Biological process | DNA repair |
GO_0036297 | Biological process | interstrand cross-link repair |
GO_0045003 | Biological process | double-strand break repair via synthesis-dependent strand annealing |
GO_0090737 | Biological process | telomere maintenance via telomere trimming |
GO_0071140 | Biological process | resolution of mitotic recombination intermediates |
GO_0006974 | Biological process | DNA damage response |
GO_0000722 | Biological process | telomere maintenance via recombination |
GO_0090657 | Biological process | telomeric loop disassembly |
GO_0000724 | Biological process | double-strand break repair via homologous recombination |
GO_0010824 | Biological process | regulation of centrosome duplication |
GO_0090267 | Biological process | positive regulation of mitotic cell cycle spindle assembly checkpoint |
GO_0006310 | Biological process | DNA recombination |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0005657 | Cellular component | replication fork |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0000781 | Cellular component | chromosome, telomeric region |
GO_0033065 | Cellular component | Rad51C-XRCC3 complex |
GO_0005634 | Cellular component | nucleus |
GO_0008821 | Molecular function | crossover junction DNA endonuclease activity |
GO_0140664 | Molecular function | ATP-dependent DNA damage sensor activity |
GO_0000400 | Molecular function | four-way junction DNA binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
Gene name | XRCC3 |
Protein name | X-ray repair cross complementing 3 DNA repair protein XRCC3 (X-ray repair cross-complementing protein 3) Full-length cDNA clone CS0DC014YE11 of Neuroblastoma of Homo sapiens (human) (X-ray repair complementing defective repair in Chinese hamster cells 3) (cDNA FLJ12767 fis, clone NT2RP2001536, highly similar to DNA-repair protein XRCC3) (cDNA FLJ13584 fis, clone PLACE1009113, highly similar to DNA-repair protein XRCC3) (cDNA FLJ42507 fis, clone BRACE2040514, highly similar to DNA-repair protein XRCC3) |
Synonyms | hCG_25500 |
Description | FUNCTION: Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions. Part of the RAD51 paralog protein complex CX3 which acts in the BRCA1-BRCA2-dependent HR pathway. Upon DNA damage, CX3 acts downstream of RAD51 recruitment; the complex binds predominantly to the intersection of the four duplex arms of the Holliday junction (HJ) and to junctions of replication forks. Involved in HJ resolution and thus in processing HR intermediates late in the DNA repair process; the function may be linked to the CX3 complex and seems to involve GEN1 during mitotic cell cycle progression. Part of a PALB2-scaffolded HR complex containing BRCA2 and RAD51C and which is thought to play a role in DNA repair by HR. Plays a role in regulating mitochondrial DNA copy number under conditions of oxidative stress in the presence of RAD51 and RAD51C. . |
Accessions | O43542 ENST00000554170.1 ENST00000554913.5 ENST00000553361.5 ENST00000554974.5 ENST00000557439.5 G3V2L7 G3V3Q2 ENST00000553264.5 ENST00000553332.5 G3V5K0 ENST00000556980.5 G3V2P3 ENST00000555055.6 G3V3H9 G3V3C8 G3V399 ENST00000556682.5 Q53XC8 ENST00000352127.11 ENST00000555964.5 |