Insufficient scRNA-seq data for expression of VENTX at single-cell level.
Insufficient scRNA-seq data for expression of VENTX at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 99% | 575.94 | 573 / 578 | 49% | 1.29 | 564 / 1155 |
kidney | 76% | 187.57 | 68 / 89 | 67% | 2.01 | 605 / 901 |
breast | 93% | 291.02 | 428 / 459 | 49% | 1.14 | 543 / 1118 |
intestine | 89% | 203.08 | 856 / 966 | 44% | 5.67 | 231 / 527 |
pancreas | 58% | 87.57 | 191 / 328 | 74% | 2.22 | 132 / 178 |
adrenal gland | 99% | 329.03 | 255 / 258 | 31% | 0.95 | 71 / 230 |
thymus | 76% | 120.27 | 496 / 653 | 53% | 1.25 | 321 / 605 |
ovary | 90% | 217.48 | 162 / 180 | 38% | 0.75 | 164 / 430 |
bladder | 86% | 206.29 | 18 / 21 | 38% | 1.92 | 189 / 504 |
prostate | 88% | 204.17 | 215 / 245 | 28% | 0.44 | 140 / 502 |
uterus | 88% | 191.16 | 149 / 170 | 27% | 0.57 | 125 / 459 |
spleen | 100% | 825.91 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 98% | 586.39 | 1181 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 93% | 358.32 | 1243 / 1335 | 0% | 0 | 0 / 0 |
skin | 52% | 101.40 | 939 / 1809 | 38% | 0.83 | 181 / 472 |
brain | 33% | 60.93 | 863 / 2642 | 56% | 1.99 | 394 / 705 |
stomach | 52% | 103.22 | 188 / 359 | 35% | 4.06 | 99 / 286 |
esophagus | 74% | 158.32 | 1063 / 1445 | 11% | 0.20 | 20 / 183 |
peripheral blood | 79% | 535.00 | 732 / 929 | 0% | 0 | 0 / 0 |
heart | 70% | 114.96 | 607 / 861 | 0% | 0 | 0 / 0 |
liver | 16% | 20.66 | 37 / 226 | 15% | 0.31 | 59 / 406 |
muscle | 28% | 30.83 | 227 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 18% | 0.42 | 8 / 45 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.17 | 4 / 29 |
eye | 0% | 0 | 0 / 0 | 6% | 0.09 | 5 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000785 | Cellular component | chromatin |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0043565 | Molecular function | sequence-specific DNA binding |
Gene name | VENTX |
Protein name | Homeobox protein VENTX (VENT homeobox homolog) (VENT-like homeobox protein 2) |
Synonyms | VENTX2 HPX42B |
Description | FUNCTION: May be involved in ventralization. |
Accessions | ENST00000325980.10 O95231 |