Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 28% ± 9% | |
astrocyte | 14 studies | 33% ± 20% | |
ciliated cell | 11 studies | 47% ± 25% | |
glutamatergic neuron | 9 studies | 49% ± 26% | |
microglial cell | 9 studies | 30% ± 16% | |
fibroblast | 9 studies | 24% ± 7% | |
macrophage | 8 studies | 26% ± 6% | |
adipocyte | 7 studies | 31% ± 11% | |
endothelial cell of lymphatic vessel | 6 studies | 36% ± 9% | |
GABAergic neuron | 6 studies | 51% ± 25% | |
T cell | 5 studies | 20% ± 4% | |
oligodendrocyte | 5 studies | 31% ± 21% | |
type I pneumocyte | 5 studies | 23% ± 5% | |
neuron | 4 studies | 38% ± 17% | |
Mueller cell | 4 studies | 29% ± 10% | |
retinal cone cell | 4 studies | 29% ± 7% | |
retinal rod cell | 4 studies | 32% ± 8% | |
monocyte | 4 studies | 22% ± 6% | |
smooth muscle cell | 4 studies | 17% ± 1% | |
interneuron | 4 studies | 55% ± 27% | |
cholangiocyte | 3 studies | 26% ± 1% | |
GABAergic interneuron | 3 studies | 21% ± 2% | |
epithelial cell | 3 studies | 40% ± 18% | |
mesothelial cell | 3 studies | 24% ± 5% | |
myeloid cell | 3 studies | 23% ± 7% | |
endothelial cell of vascular tree | 3 studies | 28% ± 12% | |
hepatocyte | 3 studies | 33% ± 10% | |
oligodendrocyte precursor cell | 3 studies | 26% ± 0% | |
ependymal cell | 3 studies | 73% ± 7% | |
alveolar macrophage | 3 studies | 28% ± 7% | |
type II pneumocyte | 3 studies | 22% ± 2% | |
lymphocyte | 3 studies | 26% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 598.15 | 653 / 653 | 99% | 3.87 | 599 / 605 |
prostate | 100% | 436.92 | 245 / 245 | 98% | 2.49 | 494 / 502 |
ovary | 100% | 393.94 | 180 / 180 | 98% | 3.93 | 423 / 430 |
breast | 100% | 452.85 | 459 / 459 | 96% | 4.56 | 1076 / 1118 |
skin | 100% | 334.43 | 1806 / 1809 | 96% | 4.81 | 455 / 472 |
bladder | 100% | 350.43 | 21 / 21 | 94% | 2.57 | 473 / 504 |
esophagus | 99% | 258.99 | 1437 / 1445 | 94% | 2.59 | 172 / 183 |
intestine | 100% | 310.70 | 964 / 966 | 94% | 2.31 | 493 / 527 |
lung | 100% | 632.75 | 577 / 578 | 92% | 2.36 | 1065 / 1155 |
stomach | 98% | 207.13 | 352 / 359 | 94% | 2.39 | 268 / 286 |
kidney | 100% | 380.07 | 89 / 89 | 90% | 2.59 | 815 / 901 |
pancreas | 94% | 150.34 | 308 / 328 | 94% | 2.39 | 167 / 178 |
uterus | 100% | 1200.71 | 170 / 170 | 84% | 2.53 | 386 / 459 |
adrenal gland | 100% | 334.88 | 258 / 258 | 71% | 1.48 | 163 / 230 |
liver | 85% | 149.21 | 191 / 226 | 74% | 3.05 | 299 / 406 |
brain | 82% | 132.95 | 2171 / 2642 | 73% | 1.76 | 517 / 705 |
spleen | 100% | 256.17 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 1.30 | 1 / 1 |
adipose | 100% | 428.74 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 351.21 | 1330 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 2.38 | 28 / 29 |
heart | 90% | 768.28 | 777 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 1.73 | 40 / 45 |
eye | 0% | 0 | 0 / 0 | 79% | 5.05 | 63 / 80 |
peripheral blood | 75% | 148.88 | 695 / 929 | 0% | 0 | 0 / 0 |
muscle | 21% | 22.64 | 170 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010975 | Biological process | regulation of neuron projection development |
GO_0046328 | Biological process | regulation of JNK cascade |
GO_0090036 | Biological process | regulation of protein kinase C signaling |
GO_1900744 | Biological process | regulation of p38MAPK cascade |
GO_0043408 | Biological process | regulation of MAPK cascade |
GO_2001222 | Biological process | regulation of neuron migration |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | ULK4 |
Protein name | Unc-51 like kinase 4 Serine/threonine-protein kinase ULK4 (EC 2.7.11.1) (Unc-51-like kinase 4) |
Synonyms | |
Description | FUNCTION: May be involved in the remodeling of cytoskeletal components, such as alpha-tubulin, and in this way regulates neurite branching and elongation, as well as cell motility. . |
Accessions | C9JVZ3 ENST00000301831.9 ENST00000414606.1 ENST00000420927.5 Q96C45 ENST00000453224.5 A0A0C4DG77 |