Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 8 studies | 23% ± 8% | |
endothelial cell | 7 studies | 24% ± 5% | |
retinal rod cell | 5 studies | 21% ± 7% | |
smooth muscle cell | 4 studies | 18% ± 2% | |
epithelial cell | 4 studies | 31% ± 9% | |
astrocyte | 4 studies | 24% ± 4% | |
oligodendrocyte | 4 studies | 22% ± 3% | |
kidney loop of Henle epithelial cell | 3 studies | 18% ± 3% | |
myofibroblast cell | 3 studies | 17% ± 1% | |
pericyte | 3 studies | 21% ± 0% | |
ciliated cell | 3 studies | 17% ± 1% | |
Mueller cell | 3 studies | 18% ± 2% | |
rod bipolar cell | 3 studies | 18% ± 2% | |
GABAergic neuron | 3 studies | 28% ± 1% | |
glutamatergic neuron | 3 studies | 30% ± 4% | |
macrophage | 3 studies | 21% ± 3% | |
basal cell | 3 studies | 25% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1640.31 | 459 / 459 | 100% | 27.14 | 1116 / 1118 |
prostate | 100% | 1419.73 | 245 / 245 | 100% | 24.59 | 501 / 502 |
thymus | 100% | 1810.09 | 653 / 653 | 100% | 32.34 | 603 / 605 |
brain | 100% | 1097.87 | 2631 / 2642 | 100% | 29.58 | 705 / 705 |
stomach | 100% | 1314.90 | 359 / 359 | 99% | 15.42 | 284 / 286 |
lung | 100% | 1134.55 | 576 / 578 | 100% | 17.65 | 1150 / 1155 |
skin | 100% | 1461.78 | 1809 / 1809 | 99% | 25.62 | 468 / 472 |
uterus | 100% | 1828.98 | 170 / 170 | 99% | 18.28 | 455 / 459 |
intestine | 100% | 1599.58 | 966 / 966 | 99% | 16.15 | 522 / 527 |
kidney | 100% | 1765.90 | 89 / 89 | 99% | 30.67 | 892 / 901 |
ovary | 100% | 2534.91 | 180 / 180 | 99% | 14.36 | 425 / 430 |
pancreas | 100% | 997.44 | 327 / 328 | 99% | 18.39 | 176 / 178 |
esophagus | 100% | 1681.38 | 1445 / 1445 | 98% | 14.36 | 180 / 183 |
bladder | 100% | 1713.29 | 21 / 21 | 98% | 16.06 | 495 / 504 |
adrenal gland | 100% | 1768.81 | 258 / 258 | 97% | 20.29 | 222 / 230 |
liver | 98% | 662.01 | 221 / 226 | 95% | 10.36 | 386 / 406 |
adipose | 100% | 1605.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2419.21 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 24.60 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.29 | 29 / 29 |
muscle | 100% | 2056.00 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1111.59 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 20.53 | 45 / 45 |
heart | 97% | 1438.09 | 835 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 53% | 551.18 | 488 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006508 | Biological process | proteolysis |
GO_0032790 | Biological process | ribosome disassembly |
GO_0033146 | Biological process | regulation of intracellular estrogen receptor signaling pathway |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0071567 | Molecular function | deUFMylase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | UFSP2 |
Protein name | UFM1 specific peptidase 2 Ufm1-specific protease 2 (UfSP2) (EC 3.4.22.-) Ufm1-specific protease 2 |
Synonyms | C4orf20 |
Description | FUNCTION: Thiol-dependent isopeptidase that recognizes and hydrolyzes the peptide bond at the C-terminal Gly of UFM1, a ubiquitin-like modifier protein bound to a number of target proteins . Does not hydrolyze SUMO1 or ISG15 ubiquitin-like proteins . Through TRIP4 deufmylation may regulate intracellular nuclear receptors transactivation and thereby regulate cell proliferation and differentiation . . |
Accessions | D6RB53 Q9NUQ7 H0Y9B0 D6RA67 ENST00000264689.11 ENST00000514247.5 H0YA18 ENST00000505357.1 D6RGX2 ENST00000509180.1 ENST00000510755.5 ENST00000502428.5 D6R9J7 ENST00000511485.5 |