Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 11 studies | 29% ± 12% | |
astrocyte | 11 studies | 32% ± 15% | |
oligodendrocyte | 11 studies | 30% ± 11% | |
glutamatergic neuron | 10 studies | 45% ± 26% | |
oligodendrocyte precursor cell | 10 studies | 31% ± 14% | |
GABAergic neuron | 8 studies | 45% ± 23% | |
ciliated cell | 8 studies | 27% ± 12% | |
microglial cell | 7 studies | 26% ± 7% | |
neuron | 6 studies | 34% ± 15% | |
interneuron | 6 studies | 46% ± 25% | |
macrophage | 6 studies | 27% ± 5% | |
epithelial cell | 6 studies | 35% ± 14% | |
fibroblast | 6 studies | 23% ± 6% | |
endothelial cell of lymphatic vessel | 5 studies | 19% ± 3% | |
granule cell | 4 studies | 24% ± 4% | |
cardiac muscle cell | 4 studies | 16% ± 1% | |
pericyte | 4 studies | 22% ± 5% | |
adipocyte | 4 studies | 21% ± 2% | |
GABAergic interneuron | 3 studies | 30% ± 3% | |
plasma cell | 3 studies | 17% ± 3% | |
OFF-bipolar cell | 3 studies | 17% ± 2% | |
ON-bipolar cell | 3 studies | 20% ± 2% | |
retina horizontal cell | 3 studies | 18% ± 2% | |
retinal rod cell | 3 studies | 19% ± 1% | |
basal cell | 3 studies | 26% ± 11% | |
ependymal cell | 3 studies | 38% ± 11% | |
type I pneumocyte | 3 studies | 21% ± 4% | |
smooth muscle cell | 3 studies | 22% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2765.29 | 1445 / 1445 | 100% | 9.34 | 183 / 183 |
breast | 100% | 2882.95 | 459 / 459 | 99% | 10.19 | 1110 / 1118 |
prostate | 100% | 3370.62 | 245 / 245 | 99% | 7.81 | 498 / 502 |
thymus | 100% | 4364.40 | 653 / 653 | 98% | 6.51 | 591 / 605 |
lung | 100% | 2563.99 | 576 / 578 | 97% | 7.07 | 1121 / 1155 |
brain | 99% | 2787.79 | 2614 / 2642 | 98% | 8.23 | 689 / 705 |
stomach | 100% | 2223.51 | 359 / 359 | 97% | 7.65 | 276 / 286 |
adrenal gland | 100% | 3080.09 | 258 / 258 | 96% | 5.76 | 221 / 230 |
ovary | 100% | 4088.92 | 180 / 180 | 96% | 5.84 | 413 / 430 |
uterus | 100% | 4015.69 | 170 / 170 | 96% | 5.78 | 440 / 459 |
bladder | 100% | 2839.76 | 21 / 21 | 96% | 6.15 | 483 / 504 |
pancreas | 100% | 2599.48 | 327 / 328 | 96% | 5.92 | 171 / 178 |
intestine | 100% | 2891.98 | 965 / 966 | 95% | 6.23 | 502 / 527 |
kidney | 100% | 2012.35 | 89 / 89 | 94% | 6.53 | 846 / 901 |
skin | 100% | 4159.76 | 1809 / 1809 | 90% | 5.30 | 425 / 472 |
liver | 100% | 1528.64 | 226 / 226 | 61% | 2.32 | 246 / 406 |
muscle | 100% | 3043.14 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2513.20 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.84 | 1 / 1 |
blood vessel | 100% | 2478.33 | 1331 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2349.81 | 1200 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1666.74 | 833 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 4.53 | 41 / 45 |
lymph node | 0% | 0 | 0 / 0 | 62% | 2.24 | 18 / 29 |
eye | 0% | 0 | 0 / 0 | 56% | 2.35 | 45 / 80 |
peripheral blood | 51% | 690.01 | 470 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006325 | Biological process | chromatin organization |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005615 | Cellular component | extracellular space |
GO_0005634 | Cellular component | nucleus |
Gene name | UBN2 |
Protein name | Ubinuclein 2 Ubinuclein-2 |
Synonyms | KIAA2030 |
Description | |
Accessions | C9J6Y5 Q6ZU65 ENST00000473989.8 [Q6ZU65-1] ENST00000486663.5 H7C4P8 ENST00000483726.1 |