Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 13 studies | 25% ± 8% | |
retinal rod cell | 7 studies | 27% ± 7% | |
retinal cone cell | 6 studies | 46% ± 13% | |
natural killer cell | 5 studies | 18% ± 3% | |
GABAergic neuron | 5 studies | 29% ± 10% | |
pericyte | 4 studies | 20% ± 2% | |
epithelial cell | 4 studies | 37% ± 16% | |
fibroblast | 4 studies | 20% ± 3% | |
glutamatergic neuron | 4 studies | 39% ± 11% | |
oligodendrocyte precursor cell | 4 studies | 25% ± 7% | |
endothelial cell of lymphatic vessel | 4 studies | 19% ± 3% | |
astrocyte | 4 studies | 23% ± 7% | |
interneuron | 4 studies | 29% ± 15% | |
oligodendrocyte | 4 studies | 19% ± 3% | |
conventional dendritic cell | 3 studies | 28% ± 14% | |
extravillous trophoblast | 3 studies | 34% ± 15% | |
myeloid cell | 3 studies | 19% ± 3% | |
ciliated cell | 3 studies | 20% ± 2% | |
dendritic cell | 3 studies | 26% ± 13% | |
connective tissue cell | 3 studies | 22% ± 3% | |
basal cell | 3 studies | 40% ± 24% | |
neuron | 3 studies | 27% ± 0% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 2809.81 | 170 / 170 | 100% | 43.30 | 458 / 459 |
ovary | 100% | 2429.58 | 180 / 180 | 100% | 39.72 | 429 / 430 |
breast | 100% | 2981.93 | 459 / 459 | 100% | 61.04 | 1115 / 1118 |
lung | 100% | 2767.86 | 578 / 578 | 100% | 43.34 | 1151 / 1155 |
brain | 100% | 1923.27 | 2636 / 2642 | 100% | 45.95 | 704 / 705 |
prostate | 100% | 3094.19 | 244 / 245 | 100% | 56.75 | 502 / 502 |
thymus | 100% | 2666.95 | 653 / 653 | 99% | 44.46 | 601 / 605 |
kidney | 100% | 2208.33 | 89 / 89 | 99% | 39.02 | 889 / 901 |
esophagus | 100% | 3018.50 | 1445 / 1445 | 98% | 53.31 | 180 / 183 |
bladder | 100% | 3759.24 | 21 / 21 | 98% | 33.42 | 494 / 504 |
stomach | 100% | 2197.53 | 359 / 359 | 98% | 33.35 | 279 / 286 |
intestine | 100% | 3743.66 | 964 / 966 | 98% | 34.95 | 515 / 527 |
pancreas | 98% | 1178.63 | 321 / 328 | 98% | 38.22 | 175 / 178 |
adrenal gland | 100% | 3293.20 | 258 / 258 | 96% | 34.80 | 221 / 230 |
skin | 100% | 2418.20 | 1807 / 1809 | 93% | 35.22 | 440 / 472 |
adipose | 100% | 3174.77 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3731.61 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2321.81 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.38 | 1 / 1 |
heart | 99% | 1791.11 | 852 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 1876.12 | 793 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 34.64 | 44 / 45 |
lymph node | 0% | 0 | 0 / 0 | 93% | 23.45 | 27 / 29 |
liver | 27% | 183.52 | 61 / 226 | 66% | 14.55 | 268 / 406 |
eye | 0% | 0 | 0 / 0 | 71% | 14.89 | 57 / 80 |
peripheral blood | 58% | 891.67 | 538 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0070936 | Biological process | protein K48-linked ubiquitination |
GO_0005829 | Cellular component | cytosol |
GO_0005634 | Cellular component | nucleus |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0061631 | Molecular function | ubiquitin conjugating enzyme activity |
GO_0005515 | Molecular function | protein binding |
GO_0005524 | Molecular function | ATP binding |
Gene name | UBE2Q2 |
Protein name | Ubiquitin-conjugating enzyme E2 Q2 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme Q2) (Ubiquitin carrier protein Q2) (Ubiquitin-protein ligase Q2) Ubiquitin conjugating enzyme E2 Q2 Alternative protein UBE2Q2 |
Synonyms | |
Description | FUNCTION: Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. . |
Accessions | L8EC84 ENST00000267938.9 [Q8WVN8-1] E9PHD0 H3BV95 ENST00000567921.1 ENST00000426727.6 H3BN94 ENST00000561851.5 [Q8WVN8-3] ENST00000561723.5 ENST00000569423.5 [Q8WVN8-4] Q8WVN8 |