Name | Number of supported studies | Average coverage | |
---|---|---|---|
hepatocyte | 6 studies | 73% ± 28% | |
enteroendocrine cell | 6 studies | 34% ± 11% | |
retinal cone cell | 6 studies | 45% ± 13% | |
endothelial cell | 6 studies | 42% ± 21% | |
pancreatic A cell | 4 studies | 99% ± 2% | |
endothelial cell of sinusoid | 4 studies | 28% ± 11% | |
epithelial cell | 4 studies | 65% ± 23% | |
retinal pigment epithelial cell | 4 studies | 92% ± 7% | |
type B pancreatic cell | 3 studies | 82% ± 26% | |
hepatic stellate cell | 3 studies | 46% ± 22% | |
T cell | 3 studies | 47% ± 24% | |
fibroblast | 3 studies | 40% ± 27% | |
cholangiocyte | 3 studies | 55% ± 28% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 118149.37 | 226 / 226 | 97% | 2282.80 | 394 / 406 |
pancreas | 100% | 11371.07 | 328 / 328 | 83% | 1961.17 | 147 / 178 |
stomach | 80% | 591.00 | 287 / 359 | 16% | 8.19 | 45 / 286 |
kidney | 70% | 73.45 | 62 / 89 | 9% | 7.46 | 81 / 901 |
brain | 57% | 1290.14 | 1510 / 2642 | 1% | 213.57 | 7 / 705 |
intestine | 39% | 35.73 | 377 / 966 | 11% | 52.77 | 59 / 527 |
eye | 0% | 0 | 0 / 0 | 39% | 94.74 | 31 / 80 |
skin | 8% | 7.82 | 149 / 1809 | 24% | 5.44 | 114 / 472 |
esophagus | 21% | 21.96 | 307 / 1445 | 9% | 13.57 | 17 / 183 |
prostate | 12% | 6.72 | 29 / 245 | 17% | 3.16 | 83 / 502 |
peripheral blood | 26% | 328.15 | 246 / 929 | 0% | 0 | 0 / 0 |
lung | 11% | 10.73 | 62 / 578 | 6% | 2.92 | 72 / 1155 |
spleen | 15% | 76.65 | 37 / 241 | 0% | 0 | 0 / 0 |
uterus | 11% | 9.46 | 18 / 170 | 4% | 3.00 | 18 / 459 |
heart | 11% | 15.72 | 95 / 861 | 0% | 0 | 0 / 0 |
thymus | 9% | 7.85 | 61 / 653 | 1% | 0.43 | 9 / 605 |
bladder | 0% | 0 | 0 / 21 | 11% | 12.75 | 53 / 504 |
adipose | 8% | 17.00 | 99 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 5% | 3.58 | 14 / 258 | 2% | 0.31 | 4 / 230 |
lymph node | 0% | 0 | 0 / 0 | 7% | 1.01 | 2 / 29 |
blood vessel | 7% | 7.80 | 87 / 1335 | 0% | 0 | 0 / 0 |
breast | 5% | 8.52 | 24 / 459 | 1% | 0.43 | 9 / 1118 |
ovary | 4% | 2.56 | 7 / 180 | 0% | 0.03 | 1 / 430 |
muscle | 1% | 0.71 | 8 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0006144 | Biological process | purine nucleobase metabolic process |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0005615 | Cellular component | extracellular space |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005576 | Cellular component | extracellular region |
GO_0005179 | Molecular function | hormone activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0070324 | Molecular function | thyroid hormone binding |
Gene name | TTR |
Protein name | Transthyretin TTR protein Transthyretin (ATTR) (Prealbumin) (TBPA) |
Synonyms | PALB transthyretin/ |
Description | FUNCTION: Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. . FUNCTION: Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. . |
Accessions | Q13736 ENST00000237014.8 ENST00000649620.1 A0A087WT59 ENST00000610404.5 A0A087WV45 Q13739 V9GZJ0 ENST00000676075.1 P02766 ENST00000613781.2 Q53WY6 |