TRIM54 | OmnibusX

Name	Number of supported studies	Average coverage
cardiac muscle cell	5 studies	46% ± 16%	Explore

Name	Number of supported studies	Average coverage
heart	3 studies	22% ± 5%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
muscle	100%	30356.99	803 / 803	0%	0	0 / 0
heart	99%	9407.29	855 / 861	0%	0	0 / 0
adrenal gland	76%	832.41	196 / 258	16%	1.29	36 / 230
pancreas	0%	1.42	1 / 328	79%	11.92	141 / 178
thymus	1%	9.49	7 / 653	72%	4.90	436 / 605
kidney	3%	11.98	3 / 89	46%	4.42	417 / 901
stomach	0%	0	0 / 359	50%	3.87	142 / 286
intestine	0%	2.16	4 / 966	46%	3.61	240 / 527
uterus	10%	53.59	17 / 170	33%	6.64	151 / 459
brain	17%	117.19	450 / 2642	19%	0.41	133 / 705
esophagus	1%	12.29	15 / 1445	34%	2.75	63 / 183
eye	0%	0	0 / 0	34%	1.11	27 / 80
lung	0%	9.43	2 / 578	33%	2.43	381 / 1155
tonsil	0%	0	0 / 0	29%	2.40	13 / 45
ovary	3%	15.99	5 / 180	24%	0.86	105 / 430
prostate	11%	152.89	26 / 245	16%	1.25	82 / 502
bladder	0%	0	0 / 21	25%	1.58	124 / 504
liver	0%	0	0 / 226	23%	1.80	94 / 406
breast	1%	13.90	6 / 459	8%	0.28	95 / 1118
skin	0%	30.17	5 / 1809	9%	0.48	41 / 472
blood vessel	5%	66.51	71 / 1335	0%	0	0 / 0
spleen	3%	20.09	8 / 241	0%	0	0 / 0
peripheral blood	2%	22.63	15 / 929	0%	0	0 / 0
adipose	1%	5.58	12 / 1204	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0007017	Biological process	microtubule-based process
GO_0007165	Biological process	signal transduction
GO_0016567	Biological process	protein ubiquitination
GO_0030154	Biological process	cell differentiation
GO_0007026	Biological process	negative regulation of microtubule depolymerization
GO_0030018	Cellular component	Z disc
GO_0005875	Cellular component	microtubule associated complex
GO_0005874	Cellular component	microtubule
GO_0005737	Cellular component	cytoplasm
GO_0061630	Molecular function	ubiquitin protein ligase activity
GO_0005515	Molecular function	protein binding
GO_0008017	Molecular function	microtubule binding
GO_0008270	Molecular function	zinc ion binding

Gene name	TRIM54
Protein name	Tripartite motif-containing protein 54 (Muscle-specific RING finger protein) (MuRF) (Muscle-specific RING finger protein 3) (MuRF-3) (MuRF3) (RING finger protein 30)
Synonyms	MURF MURF3 RNF30
Description	FUNCTION: May bind and stabilize microtubules during myotubes formation. .
Accessions	ENST00000296098.4 [Q9BYV2-2] Q9BYV2 ENST00000380075.7 [Q9BYV2-1]

TRIM54 report