Name | Number of supported studies | Average coverage | |
---|---|---|---|
natural killer cell | 5 studies | 20% ± 3% | |
B cell | 4 studies | 20% ± 3% | |
glutamatergic neuron | 4 studies | 32% ± 12% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 20% ± 4% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 19% ± 4% | |
epithelial cell | 3 studies | 34% ± 4% | |
GABAergic neuron | 3 studies | 29% ± 3% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1011.75 | 1445 / 1445 | 100% | 6.88 | 183 / 183 |
prostate | 100% | 1108.07 | 245 / 245 | 100% | 9.51 | 502 / 502 |
breast | 100% | 850.14 | 459 / 459 | 100% | 11.57 | 1117 / 1118 |
thymus | 100% | 1056.43 | 653 / 653 | 100% | 10.40 | 604 / 605 |
lung | 100% | 947.62 | 578 / 578 | 100% | 8.29 | 1153 / 1155 |
brain | 100% | 1333.07 | 2641 / 2642 | 100% | 11.20 | 704 / 705 |
bladder | 100% | 1099.67 | 21 / 21 | 100% | 9.32 | 503 / 504 |
uterus | 100% | 1499.44 | 170 / 170 | 100% | 11.12 | 458 / 459 |
ovary | 100% | 1328.09 | 180 / 180 | 100% | 8.56 | 429 / 430 |
kidney | 100% | 780.79 | 89 / 89 | 100% | 8.02 | 897 / 901 |
intestine | 100% | 1206.14 | 966 / 966 | 99% | 8.86 | 524 / 527 |
adrenal gland | 100% | 673.50 | 258 / 258 | 99% | 9.77 | 228 / 230 |
stomach | 100% | 917.29 | 359 / 359 | 99% | 8.37 | 283 / 286 |
pancreas | 100% | 636.68 | 328 / 328 | 99% | 8.28 | 176 / 178 |
liver | 100% | 535.87 | 226 / 226 | 98% | 5.62 | 398 / 406 |
skin | 100% | 790.91 | 1808 / 1809 | 94% | 6.98 | 444 / 472 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.27 | 29 / 29 |
spleen | 100% | 1309.24 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 5.48 | 1 / 1 |
adipose | 100% | 695.60 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 867.39 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 392.03 | 831 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 709.58 | 886 / 929 | 0% | 0 | 0 / 0 |
muscle | 92% | 279.31 | 736 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 80% | 3.73 | 64 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001501 | Biological process | skeletal system development |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006901 | Biological process | vesicle coating |
GO_0048208 | Biological process | COPII vesicle coating |
GO_0099022 | Biological process | vesicle tethering |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_1990071 | Cellular component | TRAPPII protein complex |
GO_0030008 | Cellular component | TRAPP complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_1990072 | Cellular component | TRAPPIII protein complex |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0044325 | Molecular function | transmembrane transporter binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TRAPPC2 |
Protein name | Trafficking protein particle complex subunit 2 (Sedlin) Trafficking protein particle complex subunit 2 |
Synonyms | SEDL |
Description | FUNCTION: Prevents transcriptional repression and induction of cell death by ENO1 (By similarity). May play a role in vesicular transport from endoplasmic reticulum to Golgi. . |
Accessions | E5RFG0 ENST00000518847 ENST00000683983.1 [P0DI81-3] ENST00000519885.5 ENST00000458511.7 [P0DI81-1] P0DI81 ENST00000359680.9 [P0DI81-1] ENST00000518847.2 [P0DI81-1] ENST00000683569.1 [P0DI81-1] ENST00000380579.6 [P0DI81-1] F5H785 |