Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 11 studies | 25% ± 10% | |
glutamatergic neuron | 8 studies | 43% ± 25% | |
astrocyte | 8 studies | 29% ± 13% | |
epithelial cell | 6 studies | 28% ± 14% | |
retinal cone cell | 6 studies | 29% ± 8% | |
cardiac muscle cell | 5 studies | 42% ± 11% | |
GABAergic neuron | 5 studies | 46% ± 21% | |
erythrocyte | 5 studies | 49% ± 23% | |
oligodendrocyte precursor cell | 4 studies | 32% ± 9% | |
fibroblast | 4 studies | 20% ± 3% | |
interneuron | 4 studies | 43% ± 21% | |
oligodendrocyte | 4 studies | 26% ± 1% | |
GABAergic interneuron | 3 studies | 18% ± 2% | |
microglial cell | 3 studies | 20% ± 2% | |
retina horizontal cell | 3 studies | 22% ± 7% | |
pericyte | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9277.46 | 2641 / 2642 | 100% | 35.40 | 704 / 705 |
prostate | 100% | 3572.39 | 244 / 245 | 100% | 23.31 | 501 / 502 |
kidney | 100% | 3572.60 | 89 / 89 | 99% | 30.25 | 893 / 901 |
intestine | 100% | 5443.97 | 966 / 966 | 99% | 19.49 | 522 / 527 |
thymus | 100% | 6615.76 | 653 / 653 | 99% | 73.89 | 599 / 605 |
breast | 100% | 4767.15 | 458 / 459 | 99% | 36.03 | 1107 / 1118 |
lung | 100% | 5277.93 | 576 / 578 | 99% | 21.92 | 1140 / 1155 |
adrenal gland | 100% | 4835.83 | 258 / 258 | 97% | 20.57 | 223 / 230 |
skin | 97% | 3909.15 | 1763 / 1809 | 99% | 55.77 | 469 / 472 |
stomach | 97% | 2912.48 | 347 / 359 | 99% | 20.64 | 282 / 286 |
esophagus | 99% | 5355.26 | 1432 / 1445 | 96% | 18.19 | 175 / 183 |
pancreas | 95% | 1979.89 | 313 / 328 | 98% | 22.37 | 175 / 178 |
ovary | 98% | 2282.22 | 176 / 180 | 96% | 15.78 | 412 / 430 |
bladder | 100% | 4902.10 | 21 / 21 | 93% | 15.59 | 470 / 504 |
uterus | 99% | 3414.69 | 169 / 170 | 93% | 17.42 | 427 / 459 |
liver | 84% | 1275.44 | 190 / 226 | 82% | 12.85 | 332 / 406 |
adipose | 100% | 5595.61 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 92.12 | 80 / 80 |
spleen | 100% | 3570.02 | 241 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 7296.78 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 7051.14 | 857 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 17.25 | 44 / 45 |
muscle | 94% | 2107.16 | 757 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 90% | 15.13 | 26 / 29 |
peripheral blood | 74% | 1430.99 | 687 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048311 | Biological process | mitochondrion distribution |
GO_0006605 | Biological process | protein targeting |
GO_0098957 | Biological process | anterograde axonal transport of mitochondrion |
GO_0022008 | Biological process | neurogenesis |
GO_0098972 | Biological process | anterograde dendritic transport of mitochondrion |
GO_0047496 | Biological process | vesicle transport along microtubule |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0005739 | Cellular component | mitochondrion |
GO_0005769 | Cellular component | early endosome |
GO_0030425 | Cellular component | dendrite |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0032839 | Cellular component | dendrite cytoplasm |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0050811 | Molecular function | GABA receptor binding |
GO_0017022 | Molecular function | myosin binding |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TRAK2 |
Protein name | Trafficking kinesin protein 2 Trafficking protein, kinesin binding 2 Trafficking kinesin-binding protein 2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 3 protein) |
Synonyms | ALS2CR3 KIAA0549 |
Description | FUNCTION: May regulate endosome-to-lysosome trafficking of membrane cargo, including EGFR. . |
Accessions | ENST00000332624.8 [O60296-1] Q53RS6 ENST00000430254.1 [O60296-2] ENST00000440597.1 O60296 Q8IU62 |