Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 5 studies | 24% ± 11% | |
epithelial cell | 5 studies | 29% ± 14% | |
classical monocyte | 4 studies | 23% ± 5% | |
non-classical monocyte | 3 studies | 25% ± 6% | |
ciliated cell | 3 studies | 23% ± 6% | |
dendritic cell | 3 studies | 34% ± 9% |
Insufficient scRNA-seq data for expression of TRAF7 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5369.00 | 1445 / 1445 | 100% | 111.00 | 183 / 183 |
ovary | 100% | 3172.59 | 180 / 180 | 100% | 93.62 | 430 / 430 |
pancreas | 100% | 3110.52 | 328 / 328 | 100% | 70.85 | 178 / 178 |
skin | 100% | 6130.02 | 1809 / 1809 | 100% | 86.34 | 470 / 472 |
uterus | 100% | 4196.00 | 170 / 170 | 100% | 80.56 | 457 / 459 |
breast | 100% | 4004.99 | 459 / 459 | 100% | 89.05 | 1113 / 1118 |
intestine | 100% | 4981.60 | 966 / 966 | 99% | 100.62 | 524 / 527 |
lung | 100% | 4420.87 | 577 / 578 | 100% | 86.36 | 1150 / 1155 |
thymus | 100% | 3742.19 | 653 / 653 | 99% | 54.71 | 601 / 605 |
stomach | 100% | 3940.43 | 359 / 359 | 99% | 92.18 | 284 / 286 |
prostate | 100% | 3656.71 | 245 / 245 | 99% | 64.79 | 497 / 502 |
bladder | 100% | 4707.00 | 21 / 21 | 98% | 75.25 | 496 / 504 |
kidney | 100% | 3313.85 | 89 / 89 | 97% | 41.16 | 876 / 901 |
brain | 97% | 2248.81 | 2562 / 2642 | 100% | 45.34 | 704 / 705 |
liver | 100% | 3247.97 | 226 / 226 | 95% | 41.47 | 385 / 406 |
adrenal gland | 100% | 3944.84 | 258 / 258 | 90% | 33.19 | 207 / 230 |
adipose | 100% | 3873.15 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 105.42 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 77.08 | 29 / 29 |
spleen | 100% | 4395.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 99.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 32.67 | 1 / 1 |
blood vessel | 100% | 3174.48 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 2487.70 | 797 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 3327.13 | 913 / 929 | 0% | 0 | 0 / 0 |
heart | 95% | 1839.90 | 818 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0007219 | Biological process | Notch signaling pathway |
GO_0070372 | Biological process | regulation of ERK1 and ERK2 cascade |
GO_0000027 | Biological process | ribosomal large subunit assembly |
GO_0043410 | Biological process | positive regulation of MAPK cascade |
GO_0043525 | Biological process | positive regulation of neuron apoptotic process |
GO_2000060 | Biological process | positive regulation of ubiquitin-dependent protein catabolic process |
GO_0006915 | Biological process | apoptotic process |
GO_2001235 | Biological process | positive regulation of apoptotic signaling pathway |
GO_0035519 | Biological process | protein K29-linked ubiquitination |
GO_0005730 | Cellular component | nucleolus |
GO_0000151 | Cellular component | ubiquitin ligase complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0031410 | Cellular component | cytoplasmic vesicle |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TRAF7 |
Protein name | E3 ubiquitin-protein ligase TRAF7 (EC 2.3.2.-) (EC 2.3.2.27) (RING finger and WD repeat-containing protein 1) (RING finger protein 119) (RING-type E3 ubiquitin transferase TRAF7) (TNF receptor-associated factor 7) TNF receptor associated factor 7 TNF receptor-associated factor 7 |
Synonyms | RNF119 RFWD1 |
Description | FUNCTION: E3 ubiquitin and SUMO-protein ligase that plays a role in different biological processes such as innate immunity, inflammation or apoptosis . Potentiates MAP3K3-mediated activation of JUN/AP1 and DDIT3 transcriptional regulators . Negatively regulates MYB transcriptional activity by sequestering it to the cytosol via SUMOylation (By similarity). Plays a role in the phosphorylation of MAPK1 and/or MAPK3, probably via its interaction with MAP3K3. Negatively regulates RLR-mediated innate immunity by promoting 'Lys-48'-linked ubiquitination of TBK1 through its RING domain to inhibit the cellular antiviral response . Promotes 'Lys-29'-linked polyubiquitination of NEMO/IKBKG and RELA leading to targeting these two proteins to lysosomal degradative pathways, reducing the transcriptional activity of NF-kappa-B . . |
Accessions | ENST00000326181.11 [Q6Q0C0-1] Q6Q0C0 ENST00000704452.1 [Q6Q0C0-1] ENST00000567645.2 A0A994J4N1 ENST00000567653.5 A0A286SD37 ENST00000564067.5 H3BR17 A0A087WUB0 ENST00000704453.1 H3BUP4 ENST00000565383.5 A0A286SD33 A0A286SD32 |