Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 43% ± 15% | |
endothelial cell | 5 studies | 22% ± 7% | |
deuterosomal cell | 4 studies | 27% ± 7% | |
epithelial cell | 4 studies | 28% ± 10% | |
GABAergic neuron | 4 studies | 42% ± 17% | |
astrocyte | 4 studies | 31% ± 7% | |
glutamatergic neuron | 3 studies | 61% ± 10% | |
ependymal cell | 3 studies | 39% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 35% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1414.85 | 459 / 459 | 100% | 26.26 | 1118 / 1118 |
esophagus | 100% | 1502.46 | 1445 / 1445 | 100% | 16.97 | 183 / 183 |
prostate | 100% | 1584.24 | 245 / 245 | 100% | 18.40 | 502 / 502 |
brain | 100% | 1340.76 | 2639 / 2642 | 100% | 13.87 | 704 / 705 |
stomach | 100% | 1008.38 | 359 / 359 | 100% | 16.38 | 285 / 286 |
ovary | 100% | 1286.28 | 180 / 180 | 100% | 16.57 | 428 / 430 |
thymus | 100% | 1890.50 | 653 / 653 | 100% | 22.60 | 602 / 605 |
intestine | 100% | 1609.49 | 966 / 966 | 99% | 16.56 | 524 / 527 |
lung | 99% | 1258.51 | 574 / 578 | 100% | 18.01 | 1154 / 1155 |
bladder | 100% | 1452.48 | 21 / 21 | 99% | 13.39 | 500 / 504 |
kidney | 100% | 960.47 | 89 / 89 | 99% | 15.95 | 892 / 901 |
uterus | 100% | 1787.16 | 170 / 170 | 99% | 16.43 | 454 / 459 |
skin | 100% | 1239.23 | 1809 / 1809 | 98% | 13.83 | 462 / 472 |
adrenal gland | 100% | 932.92 | 258 / 258 | 97% | 9.77 | 222 / 230 |
liver | 100% | 571.98 | 225 / 226 | 97% | 8.78 | 393 / 406 |
pancreas | 96% | 521.33 | 316 / 328 | 99% | 15.60 | 177 / 178 |
adipose | 100% | 1356.41 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1832.04 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 693.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 14.48 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.57 | 1 / 1 |
muscle | 100% | 1350.48 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 687.17 | 836 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 8.60 | 28 / 29 |
eye | 0% | 0 | 0 / 0 | 94% | 8.44 | 75 / 80 |
peripheral blood | 22% | 145.30 | 209 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0031333 | Biological process | negative regulation of protein-containing complex assembly |
GO_0001822 | Biological process | kidney development |
GO_0032480 | Biological process | negative regulation of type I interferon production |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_0050687 | Biological process | negative regulation of defense response to virus |
GO_0001738 | Biological process | morphogenesis of a polarized epithelium |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0035720 | Biological process | intraciliary anterograde transport |
GO_0042073 | Biological process | intraciliary transport |
GO_0005813 | Cellular component | centrosome |
GO_0030992 | Cellular component | intraciliary transport particle B |
GO_0005930 | Cellular component | axoneme |
GO_0097542 | Cellular component | ciliary tip |
GO_0005929 | Cellular component | cilium |
GO_0035869 | Cellular component | ciliary transition zone |
GO_0097546 | Cellular component | ciliary base |
GO_0036064 | Cellular component | ciliary basal body |
GO_0008017 | Molecular function | microtubule binding |
GO_0005515 | Molecular function | protein binding |
Gene name | TRAF3IP1 |
Protein name | TRAF3-interacting protein 1 (Interleukin-13 receptor alpha 1-binding protein 1) (Intraflagellar transport protein 54 homolog) (Microtubule-interacting protein associated with TRAF3) (MIP-T3) TRAF3 interacting protein 1 |
Synonyms | MIPT3 IFT54 |
Description | FUNCTION: Plays an inhibitory role on IL13 signaling by binding to IL13RA1. Involved in suppression of IL13-induced STAT6 phosphorylation, transcriptional activity and DNA-binding. Recruits TRAF3 and DISC1 to the microtubules. Involved in kidney development and epithelial morphogenesis. Involved in the regulation of microtubule cytoskeleton organization. Is a negative regulator of microtubule stability, acting through the control of MAP4 levels . Involved in ciliogenesis (By similarity). . |
Accessions | H7BZ10 Q8TDR0 ENST00000391993.7 [Q8TDR0-2] ENST00000373327.5 [Q8TDR0-1] ENST00000409739.2 |