Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 8 studies | 39% ± 24% | |
endothelial cell | 6 studies | 23% ± 9% | |
epithelial cell | 6 studies | 35% ± 18% | |
type I pneumocyte | 6 studies | 23% ± 7% | |
ciliated cell | 5 studies | 21% ± 5% | |
type II pneumocyte | 5 studies | 22% ± 4% | |
GABAergic neuron | 5 studies | 39% ± 14% | |
astrocyte | 5 studies | 28% ± 3% | |
goblet cell | 5 studies | 29% ± 19% | |
kidney loop of Henle epithelial cell | 4 studies | 19% ± 5% | |
mucus secreting cell | 4 studies | 26% ± 3% | |
retina horizontal cell | 4 studies | 34% ± 11% | |
adipocyte | 4 studies | 22% ± 3% | |
oligodendrocyte precursor cell | 4 studies | 30% ± 8% | |
basal cell | 4 studies | 30% ± 14% | |
interneuron | 4 studies | 38% ± 18% | |
amacrine cell | 3 studies | 24% ± 4% | |
retinal cone cell | 3 studies | 18% ± 1% | |
hepatocyte | 3 studies | 44% ± 12% | |
club cell | 3 studies | 24% ± 7% | |
neuron | 3 studies | 38% ± 11% | |
oligodendrocyte | 3 studies | 24% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 100% | 950.59 | 965 / 966 | 99% | 15.23 | 521 / 527 |
prostate | 100% | 1299.89 | 245 / 245 | 99% | 21.53 | 495 / 502 |
esophagus | 99% | 892.76 | 1433 / 1445 | 99% | 15.16 | 181 / 183 |
stomach | 100% | 1614.70 | 358 / 359 | 98% | 15.17 | 281 / 286 |
lung | 99% | 756.70 | 570 / 578 | 99% | 14.76 | 1140 / 1155 |
kidney | 100% | 2503.69 | 89 / 89 | 96% | 17.76 | 864 / 901 |
pancreas | 100% | 1223.82 | 328 / 328 | 95% | 11.06 | 169 / 178 |
breast | 95% | 701.69 | 438 / 459 | 97% | 22.93 | 1085 / 1118 |
liver | 100% | 1442.92 | 226 / 226 | 92% | 14.28 | 374 / 406 |
ovary | 94% | 312.91 | 169 / 180 | 98% | 10.59 | 422 / 430 |
thymus | 100% | 1656.73 | 653 / 653 | 92% | 12.86 | 555 / 605 |
uterus | 99% | 462.55 | 169 / 170 | 90% | 9.16 | 413 / 459 |
bladder | 95% | 591.33 | 20 / 21 | 92% | 11.02 | 465 / 504 |
skin | 100% | 996.56 | 1807 / 1809 | 83% | 8.17 | 394 / 472 |
adrenal gland | 100% | 1026.45 | 258 / 258 | 72% | 6.12 | 165 / 230 |
brain | 89% | 351.59 | 2343 / 2642 | 29% | 1.90 | 204 / 705 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.40 | 1 / 1 |
blood vessel | 100% | 1122.93 | 1330 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 8.64 | 41 / 45 |
adipose | 88% | 370.84 | 1063 / 1204 | 0% | 0 | 0 / 0 |
heart | 84% | 278.31 | 724 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 39% | 2.08 | 31 / 80 |
spleen | 24% | 55.61 | 58 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 13% | 57.66 | 122 / 929 | 0% | 0 | 0 / 0 |
muscle | 12% | 24.03 | 93 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045839 | Biological process | negative regulation of mitotic nuclear division |
GO_0007165 | Biological process | signal transduction |
GO_0043162 | Biological process | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
GO_0032147 | Biological process | activation of protein kinase activity |
GO_2000278 | Biological process | regulation of DNA biosynthetic process |
GO_0031954 | Biological process | positive regulation of protein autophosphorylation |
GO_0015031 | Biological process | protein transport |
GO_0005795 | Cellular component | Golgi stack |
GO_0016020 | Cellular component | membrane |
GO_0005764 | Cellular component | lysosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0010008 | Cellular component | endosome membrane |
GO_0005768 | Cellular component | endosome |
GO_0019901 | Molecular function | protein kinase binding |
GO_0035091 | Molecular function | phosphatidylinositol binding |
GO_0030295 | Molecular function | protein kinase activator activity |
GO_0030276 | Molecular function | clathrin binding |
GO_0005515 | Molecular function | protein binding |
GO_0043130 | Molecular function | ubiquitin binding |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | TOM1L1 |
Protein name | Target of myb1 like 1 membrane trafficking protein TOM1-like protein 1 (Src-activating and signaling molecule protein) (Target of Myb-like protein 1) Target of myb1 like 1 membrane trafficking protein (Target of myb1-like 1 (Chicken), isoform CRA_b) |
Synonyms | SRCASM hCG_32771 |
Description | FUNCTION: Probable adapter protein involved in signaling pathways. Interacts with the SH2 and SH3 domains of various signaling proteins when it is phosphorylated. May promote FYN activation, possibly by disrupting intramolecular SH3-dependent interactions (By similarity). . |
Accessions | ENST00000571319.5 ENST00000570499.5 I3L4G0 ENST00000445275.6 I3L3M3 I3L3T4 ENST00000575333.5 [O75674-2] ENST00000574318.1 I3L0N2 I3L1G1 ENST00000575882.6 [O75674-1] I3L4I4 ENST00000572405.5 ENST00000575909.1 O75674 ENST00000572158.5 I3L4N3 ENST00000536554.5 [O75674-3] ENST00000573607.5 K7EP47 ENST00000570371.5 [O75674-2] ENST00000570965.5 I3NI44 J3KQU4 ENST00000572360.5 I3L1Q1 ENST00000348161.8 [O75674-3] ENST00000572298.5 I3L1T2 I3L367 ENST00000576932.5 ENST00000572576.5 |