Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 11 studies | 33% ± 15% | |
GABAergic neuron | 10 studies | 39% ± 23% | |
glutamatergic neuron | 10 studies | 51% ± 24% | |
astrocyte | 9 studies | 36% ± 15% | |
neuron | 8 studies | 29% ± 10% | |
oligodendrocyte | 8 studies | 31% ± 10% | |
microglial cell | 6 studies | 25% ± 7% | |
endothelial cell | 5 studies | 33% ± 8% | |
glial cell | 4 studies | 23% ± 5% | |
retinal ganglion cell | 4 studies | 46% ± 19% | |
interneuron | 4 studies | 54% ± 24% | |
endothelial cell of lymphatic vessel | 3 studies | 17% ± 1% | |
GABAergic interneuron | 3 studies | 29% ± 3% | |
amacrine cell | 3 studies | 21% ± 2% | |
retina horizontal cell | 3 studies | 28% ± 5% | |
macrophage | 3 studies | 23% ± 4% | |
Schwann cell | 3 studies | 41% ± 18% | |
granule cell | 3 studies | 28% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 15 studies | 35% ± 22% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 15054.44 | 2641 / 2642 | 100% | 74.55 | 705 / 705 |
thymus | 76% | 1753.28 | 498 / 653 | 84% | 4.20 | 508 / 605 |
uterus | 96% | 3185.55 | 163 / 170 | 63% | 3.44 | 291 / 459 |
esophagus | 74% | 2698.33 | 1076 / 1445 | 81% | 5.30 | 149 / 183 |
breast | 66% | 1442.48 | 303 / 459 | 84% | 5.17 | 937 / 1118 |
bladder | 86% | 1994.95 | 18 / 21 | 59% | 2.85 | 298 / 504 |
lung | 66% | 1437.10 | 382 / 578 | 71% | 3.46 | 825 / 1155 |
prostate | 64% | 1744.81 | 158 / 245 | 73% | 2.89 | 366 / 502 |
intestine | 79% | 3828.56 | 760 / 966 | 52% | 2.24 | 272 / 527 |
skin | 42% | 780.02 | 760 / 1809 | 76% | 6.39 | 361 / 472 |
ovary | 76% | 1754.02 | 137 / 180 | 28% | 0.93 | 121 / 430 |
adrenal gland | 17% | 309.26 | 43 / 258 | 80% | 16.29 | 183 / 230 |
pancreas | 5% | 81.60 | 15 / 328 | 92% | 5.39 | 163 / 178 |
stomach | 34% | 1021.44 | 122 / 359 | 61% | 2.89 | 175 / 286 |
kidney | 15% | 273.42 | 13 / 89 | 79% | 7.28 | 709 / 901 |
tonsil | 0% | 0 | 0 / 0 | 78% | 3.34 | 35 / 45 |
adipose | 77% | 2129.98 | 926 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 66% | 3.42 | 19 / 29 |
spleen | 65% | 1362.34 | 157 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 49% | 1169.00 | 652 / 1335 | 0% | 0 | 0 / 0 |
heart | 40% | 1040.87 | 346 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 28% | 1.07 | 22 / 80 |
liver | 0% | 0 | 0 / 226 | 26% | 1.02 | 104 / 406 |
peripheral blood | 17% | 365.90 | 159 / 929 | 0% | 0 | 0 / 0 |
muscle | 1% | 21.88 | 11 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007015 | Biological process | actin filament organization |
GO_0051694 | Biological process | pointed-end actin filament capping |
GO_0007399 | Biological process | nervous system development |
GO_0007270 | Biological process | neuron-neuron synaptic transmission |
GO_0006936 | Biological process | muscle contraction |
GO_0030239 | Biological process | myofibril assembly |
GO_0007611 | Biological process | learning or memory |
GO_0045745 | Biological process | positive regulation of G protein-coupled receptor signaling pathway |
GO_0030016 | Cellular component | myofibril |
GO_0005856 | Cellular component | cytoskeleton |
GO_0045202 | Cellular component | synapse |
GO_0005865 | Cellular component | striated muscle thin filament |
GO_0005523 | Molecular function | tropomyosin binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | TMOD2 |
Protein name | Tropomodulin-2 (Neuronal tropomodulin) (N-Tmod) TMOD2 protein Tropomodulin 2 |
Synonyms | NTMOD hCG_1641013 |
Description | FUNCTION: Blocks the elongation and depolymerization of the actin filaments at the pointed end. The Tmod/TM complex contributes to the formation of the short actin protofilament, which in turn defines the geometry of the membrane skeleton (By similarity). . |
Accessions | ENST00000435126.6 [Q9NZR1-2] ENST00000539962.6 G5EA42 Q4G0W6 ENST00000561407.1 Q9NZR1 ENST00000249700.9 [Q9NZR1-1] H0YMA2 |