Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 3 studies | 18% ± 2% | |
epithelial cell | 3 studies | 26% ± 8% | |
macrophage | 3 studies | 18% ± 2% | |
dendritic cell | 3 studies | 24% ± 2% |
Insufficient scRNA-seq data for expression of TMEM199 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 776.48 | 21 / 21 | 100% | 6.75 | 504 / 504 |
brain | 100% | 667.87 | 2642 / 2642 | 100% | 7.52 | 705 / 705 |
esophagus | 100% | 730.22 | 1445 / 1445 | 100% | 5.27 | 183 / 183 |
intestine | 100% | 759.86 | 966 / 966 | 100% | 5.85 | 527 / 527 |
kidney | 100% | 909.49 | 89 / 89 | 100% | 5.15 | 901 / 901 |
liver | 100% | 571.91 | 226 / 226 | 100% | 5.21 | 406 / 406 |
ovary | 100% | 646.71 | 180 / 180 | 100% | 4.55 | 430 / 430 |
prostate | 100% | 853.36 | 245 / 245 | 100% | 7.12 | 502 / 502 |
skin | 100% | 949.89 | 1809 / 1809 | 100% | 8.01 | 472 / 472 |
stomach | 100% | 624.12 | 359 / 359 | 100% | 5.68 | 286 / 286 |
uterus | 100% | 825.21 | 170 / 170 | 100% | 6.18 | 459 / 459 |
breast | 100% | 818.66 | 459 / 459 | 100% | 8.38 | 1117 / 1118 |
thymus | 100% | 877.40 | 653 / 653 | 100% | 6.32 | 604 / 605 |
lung | 100% | 783.12 | 577 / 578 | 100% | 5.84 | 1155 / 1155 |
pancreas | 100% | 438.12 | 327 / 328 | 100% | 5.33 | 178 / 178 |
adrenal gland | 100% | 1015.34 | 258 / 258 | 99% | 5.70 | 228 / 230 |
adipose | 100% | 725.29 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 7.18 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 7.56 | 29 / 29 |
spleen | 100% | 1053.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 5.79 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.51 | 1 / 1 |
blood vessel | 100% | 719.09 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 396.08 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 480.59 | 850 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 733.31 | 911 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1905146 | Biological process | lysosomal protein catabolic process |
GO_0036295 | Biological process | cellular response to increased oxygen levels |
GO_0006879 | Biological process | intracellular iron ion homeostasis |
GO_0007042 | Biological process | lysosomal lumen acidification |
GO_0070072 | Biological process | vacuolar proton-transporting V-type ATPase complex assembly |
GO_0033116 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment membrane |
GO_0030663 | Cellular component | COPI-coated vesicle membrane |
GO_0005764 | Cellular component | lysosome |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0016471 | Cellular component | vacuolar proton-transporting V-type ATPase complex |
GO_0012505 | Cellular component | endomembrane system |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005515 | Molecular function | protein binding |
GO_0008142 | Molecular function | oxysterol binding |
Gene name | TMEM199 |
Protein name | Transmembrane protein 199 |
Synonyms | C17orf32 |
Description | FUNCTION: Accessory component of the proton-transporting vacuolar (V)-ATPase protein pump involved in intracellular iron homeostasis. In aerobic conditions, required for intracellular iron homeostasis, thus triggering the activity of Fe(2+) prolyl hydroxylase (PHD) enzymes, and leading to HIF1A hydroxylation and subsequent proteasomal degradation. Necessary for endolysosomal acidification and lysosomal degradation . May be involved in Golgi homeostasis . Binds 20(S)-hydroxycholesterol (20(S)-OHC) (By similarity). . |
Accessions | J3KS81 ENST00000580868.5 K7EJL8 J3KRW7 ENST00000292114.8 Q8N511 ENST00000555264.6 ENST00000395404.7 |