Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 27 studies | 40% ± 17% | |
macrophage | 20 studies | 33% ± 17% | |
classical monocyte | 14 studies | 31% ± 11% | |
non-classical monocyte | 10 studies | 34% ± 14% | |
monocyte | 10 studies | 34% ± 15% | |
conventional dendritic cell | 9 studies | 25% ± 13% | |
dendritic cell | 9 studies | 46% ± 19% | |
mast cell | 8 studies | 20% ± 4% | |
connective tissue cell | 8 studies | 39% ± 17% | |
myeloid cell | 8 studies | 31% ± 13% | |
enterocyte | 7 studies | 51% ± 20% | |
epithelial cell of proximal tubule | 6 studies | 59% ± 13% | |
epithelial cell | 6 studies | 55% ± 20% | |
goblet cell | 6 studies | 40% ± 15% | |
glial cell | 6 studies | 46% ± 18% | |
progenitor cell | 5 studies | 31% ± 14% | |
mesothelial cell | 5 studies | 39% ± 11% | |
brush cell | 5 studies | 54% ± 9% | |
myofibroblast cell | 5 studies | 36% ± 14% | |
pancreatic A cell | 4 studies | 81% ± 11% | |
enteroendocrine cell | 4 studies | 37% ± 17% | |
abnormal cell | 4 studies | 32% ± 25% | |
kidney loop of Henle epithelial cell | 4 studies | 33% ± 13% | |
microglial cell | 4 studies | 25% ± 9% | |
adventitial cell | 4 studies | 24% ± 11% | |
hepatocyte | 4 studies | 56% ± 31% | |
pancreatic D cell | 3 studies | 53% ± 22% | |
intestinal crypt stem cell | 3 studies | 39% ± 0% | |
transit amplifying cell | 3 studies | 30% ± 9% | |
neuroendocrine cell | 3 studies | 74% ± 8% | |
intermediate monocyte | 3 studies | 42% ± 9% | |
mononuclear phagocyte | 3 studies | 38% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 33480.70 | 226 / 226 | 96% | 547.73 | 388 / 406 |
stomach | 99% | 2256.44 | 357 / 359 | 92% | 174.59 | 264 / 286 |
kidney | 100% | 11206.58 | 89 / 89 | 89% | 441.29 | 800 / 901 |
intestine | 100% | 6100.45 | 964 / 966 | 87% | 173.01 | 459 / 527 |
lung | 99% | 3442.51 | 574 / 578 | 57% | 57.28 | 657 / 1155 |
pancreas | 63% | 819.88 | 205 / 328 | 88% | 119.24 | 156 / 178 |
bladder | 100% | 2900.67 | 21 / 21 | 40% | 73.30 | 200 / 504 |
ovary | 100% | 5665.52 | 180 / 180 | 39% | 36.02 | 168 / 430 |
breast | 99% | 2966.66 | 455 / 459 | 38% | 33.27 | 424 / 1118 |
esophagus | 93% | 1837.34 | 1349 / 1445 | 42% | 52.65 | 77 / 183 |
adrenal gland | 86% | 1182.48 | 222 / 258 | 33% | 52.12 | 76 / 230 |
uterus | 83% | 1179.02 | 141 / 170 | 24% | 24.20 | 109 / 459 |
brain | 72% | 970.54 | 1895 / 2642 | 29% | 26.91 | 201 / 705 |
spleen | 100% | 3093.75 | 240 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 3300.94 | 1189 / 1204 | 0% | 0 | 0 / 0 |
thymus | 87% | 1311.86 | 571 / 653 | 11% | 6.67 | 67 / 605 |
lymph node | 0% | 0 | 0 / 0 | 97% | 107.31 | 28 / 29 |
skin | 67% | 983.35 | 1219 / 1809 | 26% | 18.20 | 124 / 472 |
heart | 89% | 2448.22 | 763 / 861 | 0% | 0 | 0 / 0 |
prostate | 86% | 1597.96 | 210 / 245 | 1% | 0.54 | 6 / 502 |
blood vessel | 57% | 1137.69 | 765 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 45% | 981.35 | 421 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 22% | 12.49 | 10 / 45 |
muscle | 6% | 54.55 | 52 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 6% | 2.82 | 5 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_2001199 | Biological process | negative regulation of dendritic cell differentiation |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | TMEM176A |
Protein name | Transmembrane protein 176A Transmembrane protein 176A (Hepatocellular carcinoma-associated antigen 112) |
Synonyms | HCA112 |
Description | |
Accessions | ENST00000484928.5 ENST00000475536.5 Q96HP8 ENST00000004103.8 ENST00000461345.5 H7C4P5 C9JJ63 ENST00000468689.2 |