Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 17 studies | 73% ± 11% | |
type I pneumocyte | 11 studies | 41% ± 16% | |
type II pneumocyte | 10 studies | 37% ± 14% | |
club cell | 10 studies | 46% ± 10% | |
epithelial cell | 10 studies | 29% ± 11% | |
respiratory goblet cell | 8 studies | 62% ± 11% | |
secretory cell | 7 studies | 35% ± 12% | |
mucus secreting cell | 7 studies | 48% ± 17% | |
enterocyte | 6 studies | 33% ± 9% | |
goblet cell | 6 studies | 42% ± 29% | |
deuterosomal cell | 4 studies | 39% ± 7% | |
duct epithelial cell | 4 studies | 56% ± 15% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 35% ± 8% | |
luminal cell of prostate epithelium | 4 studies | 43% ± 5% | |
brush cell | 4 studies | 21% ± 5% | |
squamous epithelial cell | 3 studies | 51% ± 20% | |
basal cell | 3 studies | 37% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 94% | 2413.09 | 231 / 245 | 96% | 54.90 | 482 / 502 |
stomach | 77% | 2933.29 | 278 / 359 | 96% | 70.51 | 274 / 286 |
lung | 100% | 3002.15 | 577 / 578 | 70% | 42.82 | 814 / 1155 |
intestine | 55% | 2304.92 | 529 / 966 | 96% | 59.10 | 505 / 527 |
pancreas | 62% | 309.66 | 204 / 328 | 84% | 63.37 | 149 / 178 |
breast | 63% | 1199.14 | 291 / 459 | 64% | 29.66 | 718 / 1118 |
esophagus | 20% | 95.12 | 283 / 1445 | 52% | 64.69 | 96 / 183 |
thymus | 63% | 155.32 | 413 / 653 | 0% | 0.05 | 3 / 605 |
bladder | 5% | 35.86 | 1 / 21 | 40% | 16.64 | 200 / 504 |
skin | 44% | 99.74 | 795 / 1809 | 0% | 0.02 | 1 / 472 |
uterus | 14% | 65.28 | 23 / 170 | 29% | 14.45 | 135 / 459 |
liver | 24% | 93.34 | 55 / 226 | 15% | 5.39 | 59 / 406 |
adipose | 23% | 64.23 | 274 / 1204 | 0% | 0 | 0 / 0 |
ovary | 5% | 12.02 | 9 / 180 | 17% | 2.53 | 71 / 430 |
tonsil | 0% | 0 | 0 / 0 | 11% | 2.44 | 5 / 45 |
kidney | 4% | 8.72 | 4 / 89 | 6% | 1.14 | 55 / 901 |
peripheral blood | 8% | 23.43 | 78 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 3.86 | 20 / 1335 | 0% | 0 | 0 / 0 |
heart | 1% | 1.39 | 7 / 861 | 0% | 0 | 0 / 0 |
adrenal gland | 1% | 1.30 | 2 / 258 | 0% | 0 | 0 / 230 |
brain | 0% | 0.54 | 11 / 2642 | 0% | 0 | 0 / 705 |
spleen | 0% | 0.54 | 1 / 241 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.36 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0034220 | Biological process | monoatomic ion transmembrane transport |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0008381 | Molecular function | mechanosensitive monoatomic ion channel activity |
Gene name | TMC5 |
Protein name | Transmembrane channel-like protein Transmembrane channel like 5 Transmembrane channel-like protein 5 |
Synonyms | UNQ8238/PRO33604 |
Description | FUNCTION: Probable ion channel. . |
Accessions | ENST00000561503.5 [Q6UXY8-4] I3L469 ENST00000542583.7 [Q6UXY8-1] I3L0P3 F5GYU8 ENST00000396229.6 [Q6UXY8-1] ENST00000541464.5 H3BN68 ENST00000574033.1 ENST00000219821.9 [Q6UXY8-3] ENST00000572147.1 ENST00000564959.1 Q6UXY8 ENST00000381414.8 [Q6UXY8-2] |