Insufficient scRNA-seq data for expression of TLX1 at single-cell level.
Insufficient scRNA-seq data for expression of TLX1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 96% | 63.54 | 216 / 226 | 61% | 3.43 | 248 / 406 |
intestine | 46% | 24.05 | 447 / 966 | 76% | 3.96 | 403 / 527 |
spleen | 100% | 6122.59 | 241 / 241 | 0% | 0 | 0 / 0 |
stomach | 28% | 3.42 | 99 / 359 | 71% | 4.10 | 204 / 286 |
pancreas | 68% | 10.19 | 224 / 328 | 23% | 0.62 | 41 / 178 |
heart | 75% | 24.07 | 647 / 861 | 0% | 0 | 0 / 0 |
esophagus | 5% | 0.65 | 75 / 1445 | 53% | 4.26 | 97 / 183 |
brain | 3% | 0.26 | 68 / 2642 | 50% | 5.94 | 353 / 705 |
bladder | 0% | 0 | 0 / 21 | 33% | 2.31 | 164 / 504 |
thymus | 23% | 2.78 | 150 / 653 | 8% | 3.39 | 47 / 605 |
adipose | 30% | 12.74 | 367 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 4% | 0.87 | 10 / 258 | 27% | 3.28 | 61 / 230 |
breast | 6% | 3.15 | 26 / 459 | 20% | 2.66 | 223 / 1118 |
lung | 2% | 0.29 | 11 / 578 | 23% | 2.32 | 266 / 1155 |
uterus | 3% | 0.55 | 5 / 170 | 18% | 2.69 | 83 / 459 |
tonsil | 0% | 0 | 0 / 0 | 20% | 1.52 | 9 / 45 |
skin | 9% | 0.99 | 160 / 1809 | 11% | 1.92 | 51 / 472 |
ovary | 10% | 1.55 | 18 / 180 | 4% | 0.16 | 17 / 430 |
blood vessel | 12% | 1.84 | 157 / 1335 | 0% | 0 | 0 / 0 |
prostate | 6% | 0.62 | 14 / 245 | 1% | 0.03 | 5 / 502 |
muscle | 6% | 0.69 | 45 / 803 | 0% | 0 | 0 / 0 |
kidney | 4% | 0.37 | 4 / 89 | 1% | 0.03 | 7 / 901 |
peripheral blood | 1% | 0.19 | 12 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0048513 | Biological process | animal organ development |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | TLX1 |
Protein name | T-cell leukemia homeobox protein 1 (Homeobox protein Hox-11) (Proto-oncogene TCL-3) (T-cell leukemia/lymphoma protein 3) T cell leukemia homeobox 1 |
Synonyms | TCL3 HOX11 |
Description | FUNCTION: Controls the genesis of the spleen. Binds to the DNA sequence 5'-GGCGGTAAGTGG-3'. |
Accessions | ENST00000370196.11 [P31314-1] P31314 ENST00000467928.2 [P31314-2] ENST00000463716.3 G3V1B7 |